RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PAK1IP1Q9NWT1 392 aaPredicted RBP8.42□□□□□ -1.06
GABPB1-205ENST00000429662 THG1LQ9NWX6 298 aaKnown RBP8.42□□□□□ -1.06
GABPB1-205ENST00000429662 NDRG4Q9ULP0 352 aaKnown RBP8.42□□□□□ -1.06
GABPB1-205ENST00000429662 RUVBL1Q9Y265 456 aaKnown RBP8.42□□□□□ -1.06
GABPB1-205ENST00000429662 WDR37Q9Y2I8 494 aa8.42□□□□□ -1.06
GABPB1-205ENST00000429662 A3GALT2U3KPV4 340 aa8.42□□□□□ -1.06
GABPB1-205ENST00000429662 ZFC3H1O60293 1989 aaKnown RBP8.42□□□□□ -1.06
GABPB1-205ENST00000429662 AKAP13Q12802 2813 aa8.42□□□□□ -1.06
GABPB1-205ENST00000429662 ISPDA4D126 451 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 SAGE2PA6NJ88 616 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TBKBP1A7MCY6 615 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 A8MVJ9 347 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 MAGEB17A8MXT2 336 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CLIC1O00299 241 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FPGTO14772 594 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 AREL1O15033 823 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PRAMEF12O95522 483 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 OLFM2O95897 454 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 C9P02748 559 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FTH1P02794 183 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 RB1P06400 928 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 SRPRAP08240 638 aaKnown RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PFKLP17858 780 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 SDC1P18827 310 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 AGXTP21549 392 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 AOAHP28039 575 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PTPN6P29350 595 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CTNNB1P35222 781 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 OPRL1P41146 370 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 GCGRP47871 477 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PXNP49023 591 aaPredicted RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 IST1P53990 364 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 EPHB3P54753 998 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 ITGA1P56199 1179 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PHC1P78364 1004 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 AQP6Q13520 282 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 RAPSNQ13702 412 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TEAD4Q15561 434 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CPSF6Q16630 551 aaKnown RBP eCLIP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FRG2Q64ET8 278 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 NOXRED1Q6NXP6 359 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 DNAJC14Q6Y2X3 702 aaPredicted RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 B3GNT8Q7Z7M8 397 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TMEM179BQ7Z7N9 219 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TRIM74Q86UV6 250 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TRIM73Q86UV7 250 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 LACC1Q8IV20 430 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 ZZZ3Q8IYH5 903 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CHPFQ8IZ52 775 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 OR2AP1Q8NGE2 309 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FRS2Q8WU20 508 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 MYDGFQ969H8 173 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CXorf40BQ96DE9 158 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FRG2BQ96QU4 278 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 YME1L1Q96TA2 773 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CPEB1Q9BZB8 566 aaKnown RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 RNF38Q9H0F5 515 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 BRF2Q9HAW0 419 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FARSBQ9NSD9 589 aaKnown RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PLCXD1Q9NUJ7 323 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 ADPRHL2Q9NX46 363 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 SELENONQ9NZV5 590 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 ENOPH1Q9UHY7 261 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 EVLQ9UI08 416 aaPredicted RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 BTNL2Q9UIR0 455 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 TDRKHQ9Y2W6 561 aaKnown RBP8.41□□□□□ -1.06
GABPB1-205ENST00000429662 YIPF1Q9Y548 306 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 PCDHGB3Q9Y5G1 929 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 CPQQ9Y646 472 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 FREM2Q5SZK8 3169 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 GREB1Q4ZG55 1949 aa8.41□□□□□ -1.06
GABPB1-205ENST00000429662 E9PQ18 207 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 TMX2-CTNND1H3BSU7 103 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 GFYI3L273 518 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 FAM20BO75063 409 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 SERPINB7O75635 380 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 INMTO95050 263 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 KCNK5O95279 499 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 SEC24AO95486 1093 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ZNF682O95780 498 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 FUCA1P04066 466 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 MYCLP1P12525 358 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 ENGP17813 658 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 EPORP19235 508 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 PRKACGP22612 351 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 TPP2P29144 1249 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CD40LGP29965 261 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CCR7P32248 378 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 RPL3P39023 403 aaKnown RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 HNF4AP41235 474 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 CLK3P49761 638 aaKnown RBP8.4□□□□□ -1.06
GABPB1-205ENST00000429662 DAPP51397 102 aa8.4□□□□□ -1.06
GABPB1-205ENST00000429662 POLR2LP62875 67 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms