RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 SLC16A5O15375 505 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ZSCAN9O15535 394 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ZBTB14O43829 449 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 NRP2O60462 931 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 KLF7O75840 302 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 C8GP07360 202 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 PRF1P14222 555 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 HSD17B2P37059 387 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 GRIA3P42263 894 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 TSFMP43897 325 aaKnown RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 PNLIPRP1P54315 467 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 IL2P60568 153 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 SF1Q15637 639 aaKnown RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 PHKG1Q16816 387 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 SWI5Q1ZZU3 235 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 KBTBD12Q3ZCT8 623 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 UBAP2Q5T6F2 1119 aaKnown RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ZNF385CQ66K41 422 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 RHBDD2Q6NTF9 364 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 UBE2R2Q712K3 238 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 GDF7Q7Z4P5 450 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 CEP97Q8IW35 865 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 RAB42Q8N4Z0 105 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 FAR1Q8WVX9 515 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 SMPDL3AQ92484 453 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ZUFSPQ96AP4 578 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 GPR22Q99680 433 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 RBBP8Q99708 897 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 CPNE1Q99829 537 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ROPN1BQ9BZX4 212 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ROPN1Q9HAT0 212 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 POPDC3Q9HBV1 291 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 ZBTB20Q9HC78 741 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 STOX2Q9P2F5 926 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 DHCR7Q9UBM7 475 aaKnown RBP10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
APOBEC3C-202ENST00000428892 OR2A25A4D2G3 310 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 HMGB1P1B2RPK0 211 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 MASP2O00187 686 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 RIPK2O43353 540 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 CTSVO60911 334 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ALOX12BO75342 701 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 NUDT17P0C025 328 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PIM1P11309 404 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ALAS2P22557 587 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 GRNP28799 593 aaKnown RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 GP5P40197 560 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SLC29A2Q14542 456 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ZNF460Q14592 562 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 TLR1Q15399 786 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ZKSCAN8Q15776 578 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PPP1R3AQ16821 1122 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PRAMEF13Q5VWM6 474 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 B3GNTL1Q67FW5 361 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 TLDC1Q6P9B6 456 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 FIGLAQ6QHK4 219 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SUSD1Q6UWL2 747 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SBSNQ6UWP8 590 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 RNF44Q7L0R7 432 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PPP1R32Q7Z5V6 425 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 MYO1HQ8N1T3 1032 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ZNF655Q8N720 491 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PPFIBP2Q8ND30 876 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 FBF1Q8TES7 1133 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ANKRD49Q8WVL7 239 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 CDKL2Q92772 493 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 MIPEPQ99797 713 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SH3GL2Q99962 352 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SYNPO2LQ9H987 977 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PARVBQ9HBI1 364 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 SLC6A20Q9NP91 592 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 OLAHQ9NV23 265 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 INTS7Q9NVH2 962 aaKnown RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 EURLQ9NYK6 297 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 FBXL4Q9UKA2 621 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ITGB1BP2Q9UKP3 347 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 PLCL2Q9UPR0 1127 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 MTO1Q9Y2Z2 717 aaKnown RBP10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 CSAG2Q9Y5P2 127 aa10.33□□□□□ -0.76
APOBEC3C-202ENST00000428892 ZNF839A8K0R7 811 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 H3BQF6 201 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 E2F3O00716 465 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 SYF2O95926 243 aaKnown RBP10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 COX6B1P14854 86 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 STX2P32856 288 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 PHBP35232 272 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 SOX8P57073 446 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 POU4F1Q01851 419 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 PRDX1Q06830 199 aaKnown RBP10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 NAB1Q13506 487 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 EFTUD2Q15029 972 aaKnown RBP eCLIP10.32□□□□□ -0.763e-8■■■■□ 19.4
APOBEC3C-202ENST00000428892 UAP1Q16222 522 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 RBBP7Q16576 425 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 TUBB8Q3ZCM7 444 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 NKAIN1Q4KMZ8 207 aa10.32□□□□□ -0.76
APOBEC3C-202ENST00000428892 CRB2Q5IJ48 1285 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms