RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 CERS2Q96G23 380 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 METTL2AQ96IZ6 378 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 COQ10AQ96MF6 247 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 KCTD14Q9BQ13 255 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 RIOK2Q9BVS4 552 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 NMRAL1Q9HBL8 299 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 ZNF304Q9HCX3 659 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 C11orf16Q9NQ32 467 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 AASDHPPTQ9NRN7 309 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 DDX28Q9NUL7 540 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 ATPIF1Q9UII2 106 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 SDHDO14521 159 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 NPHS1O60500 1241 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 TRIM16O95361 564 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 SNAP29O95721 258 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 GFAPP14136 432 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 BCKDHBP21953 392 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 ARNTP27540 789 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 ELK4P28324 431 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 SPRP35270 261 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 ETV6P41212 452 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 RPS5P46782 204 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 CDKN1CP49918 316 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 ALDH3A2P51648 485 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 RACK1P63244 317 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 RPL6Q02878 288 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 SRSF5Q13243 272 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 IKZF1Q13422 519 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 FGL2Q14314 439 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 DPY19L1Q2PZI1 675 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 PLA2G4EQ3MJ16 856 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 USP39Q53GS9 565 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 ARL13AQ5H913 290 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 FAM205BPQ63HN1 556 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 TMEM198Q66K66 360 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 RAET1GQ6H3X3 334 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 AFTPHQ6ULP2 937 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 GK5Q6ZS86 529 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 GDPD3Q7L5L3 318 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 HDDC2Q7Z4H3 204 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 BMP8AQ7Z5Y6 402 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 TECPR1Q7Z6L1 1165 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 LDB1Q86U70 411 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 OR5H6Q8NGV6 325 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 OR4L1Q8NH43 312 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 PIK3R3Q92569 461 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 AGAP2Q99490 1192 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 BDH2Q9BUT1 245 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 SLC17A9Q9BYT1 436 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 NXF2Q9GZY0 626 aaKnown RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 FAM83DQ9H4H8 585 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 MBD1Q9UIS9 605 aaPredicted RBP11.03□□□□□ -0.64
CECR3-201ENST00000428828 GON4LQ3T8J9 2241 aa11.03□□□□□ -0.64
CECR3-201ENST00000428828 SDK1Q7Z5N4 2213 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 HMX3A6NHT5 357 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 K7ESM1 405 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 GAPDHSO14556 408 aaPredicted RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 TOR1BO14657 336 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 KATNA1O75449 491 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 PRSS23O95084 383 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 TDGF1P13385 188 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 CFL1P23528 166 aaKnown RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 LIMK2P53671 638 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 OR2B6P58173 313 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 GPLD1P80108 840 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 ACVR1Q04771 509 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 PLCL1Q15111 1095 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 CHRNA6Q15825 494 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 ZNF284Q2VY69 593 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 SETMARQ53H47 684 aaPredicted RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 COQ5Q5HYK3 327 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 RBM20Q5T481 1227 aaKnown RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 ZNF470Q6ECI4 717 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 ZNF438Q7Z4V0 828 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 P2RY8Q86VZ1 359 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 METTL4Q8N3J2 472 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 REXO5Q96IC2 774 aaKnown RBP11.02□□□□□ -0.65
CECR3-201ENST00000428828 NODALQ96S42 347 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 ASB8Q9H765 288 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 CATSPERZQ9NTU4 200 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 ZDHHC2Q9UIJ5 367 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 MKLN1Q9UL63 735 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 RIMKLBQ9ULI2 386 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 CA5BQ9Y2D0 317 aa11.02□□□□□ -0.65
CECR3-201ENST00000428828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
CECR3-201ENST00000428828 A0A1W2PQ72 361 aa11.01□□□□□ -0.65
CECR3-201ENST00000428828 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
CECR3-201ENST00000428828 INPP4BO15327 924 aa11.01□□□□□ -0.65
CECR3-201ENST00000428828 CAPN5O15484 640 aaPredicted RBP11.01□□□□□ -0.65
CECR3-201ENST00000428828 DFNA5O60443 496 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms