RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 WBP1Q96G27 269 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF419Q96HQ0 510 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-206ENST00000428313 P2RY13Q9BPV8 354 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 GSX2Q9BZM3 304 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ARHGAP39Q9C0H5 1083 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 ATP13A1Q9HD20 1204 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 FANCFQ9NPI8 374 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 MS4A12Q9NXJ0 267 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 GALPQ9UBC7 116 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 RAB23Q9ULC3 237 aa15.56■□□□□ 0.08
C9orf3-206ENST00000428313 BPTFQ12830 3046 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 LCHNA4D1U4 455 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 MATN3O15232 486 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ONECUT3O60422 494 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PLOD3O60568 738 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SLC2A3P11169 496 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PIPP12273 146 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 RPA4Q13156 261 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 MAD2L1Q13257 205 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 DMC1Q14565 340 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 KLHL22Q53GT1 634 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 IGSF11Q5DX21 431 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ZNF628Q5EBL2 1059 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SPANXN4Q5MJ08 99 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 IL27RAQ6UWB1 636 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 TRILQ7L0X0 811 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 TMEM132CQ8N3T6 1108 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 OR6M1Q8NGM8 313 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 WDR36Q8NI36 951 aaKnown RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FANK1Q8TC84 345 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SLC16A10Q8TF71 515 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 AHCYL2Q96HN2 611 aaKnown RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 RADILQ96JH8 1075 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 GFM1Q96RP9 751 aaKnown RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 DPCDQ9BVM2 203 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 DPY30Q9C005 99 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 KCNH6Q9H252 994 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 CLMPQ9H6B4 373 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ANKRA2Q9H9E1 313 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PLEKHB1Q9UF11 243 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PCDHGA2Q9Y5H1 932 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 KCNMB2Q9Y691 235 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 CDH10Q9Y6N8 788 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SESN1Q9Y6P5 492 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 GBF1Q92538 1859 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 KRBOX1C9JBD0 128 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 HLA-DQB2P05538 268 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ACSM4P0C7M7 580 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ODC1P11926 461 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 HLA-EP13747 358 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 MAOBP27338 520 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 AGTR2P50052 363 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 WNT3AP56704 352 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 POLR2GP62487 172 aaKnown RBP eCLIP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FGFBP1Q14512 234 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FAM187BQ17R55 369 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 RFTN2Q52LD8 501 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PLAG1Q6DJT9 500 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 RTL4Q6ZR62 310 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 BBS7Q8IWZ6 715 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SLC34A3Q8N130 599 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 C10orf111Q8N326 155 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 ATP6V1C2Q8NEY4 427 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 GPR150Q8NGU9 434 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FUBP1Q96AE4 644 aaKnown RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 PGAP3Q96FM1 320 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 LINC00052Q96N35 136 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FOPNLQ96NB1 174 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 RBP7Q96R05 134 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SOSTQ9BQB4 213 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 AARSD1Q9BTE6 412 aaKnown RBP15.55■□□□□ 0.08
C9orf3-206ENST00000428313 MED9Q9NWA0 146 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 NDUFB11Q9NX14 153 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 FAM8A1Q9UBU6 413 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 SSR3Q9UNL2 185 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 COPS3Q9UNS2 423 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 MAB21L2Q9Y586 359 aa15.55■□□□□ 0.08
C9orf3-206ENST00000428313 A0A1W2PPL8 197 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SGK494L7N484 410 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 LDOC1O95751 146 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SLC10A3P09131 477 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SLC2A4P14672 509 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 WARSP23381 471 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 HOXA1P49639 335 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 HTR6P50406 440 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 ERVPABLB-1P60509 514 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 TSNQ15631 228 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 FBXO48Q5FWF7 155 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 FAM182BQ5T319 152 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 Q8N402 240 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 DCBLD1Q8N8Z6 715 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SRFBP1Q8NEF9 429 aaKnown RBP15.54■□□□□ 0.08
C9orf3-206ENST00000428313 AP3S1Q92572 193 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 UCN3Q969E3 161 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 SERPINB11Q96P15 392 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 OR52E6Q96RD3 313 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 KCNJ15Q99712 375 aa15.54■□□□□ 0.08
C9orf3-206ENST00000428313 CCM2Q9BSQ5 444 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms