RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 GPN3Q9UHW5 284 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 NOP16Q9Y3C1 178 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 H7C2Y5 167 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 DUOXA1Q1HG43 343 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ABCA11PQ4W5N1 156 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ANKRD26P1Q6NSI1 321 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PRSS58Q8IYP2 241 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 POGLUT1Q8NBL1 392 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 SLC22A14Q9Y267 594 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 KCTD3Q9Y597 815 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 SCN11AQ9UI33 1791 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TBX18O95935 607 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 NPR2P20594 1047 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 AP1S1P61966 158 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 TIGD4Q8IY51 512 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
PTPRU-204ENST00000428026 MS4A12Q9NXJ0 267 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 ERVK-18Q9QC07 812 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 CPQQ9Y646 472 aa14.07□□□□□ -0.16
PTPRU-204ENST00000428026 PRORSD1PA6NEY8 169 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 LOC730098B7Z3J9 87 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 NFATC1O95644 943 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GBAP04062 536 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 HLA-DPB1P04440 258 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 RB1P06400 928 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 MLLT10P55197 1068 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GNG2P59768 71 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 EIF5AP63241 154 aaKnown RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 KCNAB2Q13303 367 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 FBXO46Q6PJ61 603 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 HSDL2Q6YN16 418 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SLC22A15Q8IZD6 547 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 LYARQ9NX58 379 aaKnown RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 DLGAP1O14490 977 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 TOXO94900 526 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 HMGN1P05114 100 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 KLK1P06870 262 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 CSF2RAP15509 400 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SMSP52788 366 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SEMA3AQ14563 771 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 NCEH1Q6PIU2 408 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GOLGA7Q7Z5G4 137 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GALNT13Q8IUC8 556 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 TMEM80Q96HE8 168 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 ALPK1Q96QP1 1244 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GPR22Q99680 433 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 FARSAQ9Y285 508 aaKnown RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 MAB21L2Q9Y586 359 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 FAM170BA6NMN3 283 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 EPHX1P07099 455 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 CKMT1AP12532 417 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 OR1E2P47887 323 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 TMBIM6P55061 237 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 CDK6Q00534 326 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GARNL3Q5VVW2 1013 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 KCTD9Q7L273 389 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 GPR135Q8IZ08 494 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 TCEANCQ8N8B7 351 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 DENND6BQ8NEG7 585 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 LCN9Q8WX39 176 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SLC25A36Q96CQ1 311 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 XKR8Q9H6D3 395 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 SPATA7Q9P0W8 599 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 CYTH4Q9UIA0 394 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 YARS2Q9Y2Z4 477 aaKnown RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 KLHL33A6NCF5 533 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 AXIN1O15169 862 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF3P17036 446 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 PNLIPRP1P54315 467 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 CDH11P55287 796 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 HAGHLQ6PII5 290 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-204ENST00000428026 C17orf99Q6UX52 265 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 OR2L8Q8NGY9 312 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 STOML3Q8TAV4 291 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 TAPBPLQ9BX59 468 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 OR2AG1Q9H205 316 aa14.06□□□□□ -0.16
PTPRU-204ENST00000428026 OAZ2O95190 189 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 DIO3P55073 304 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 RAB30Q15771 203 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 EIF2S3LQ2VIR3 472 aaKnown RBP14.05□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF675Q8TD23 568 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 MAPKAP1Q9BPZ7 522 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 ASPNQ9BXN1 380 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 TMEM168Q9H0V1 697 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 J3KR12 359 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 FANCGO15287 622 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 GATMP50440 423 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 CHAF1BQ13112 559 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 MOGSQ13724 837 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 LRRC37A5PQ49AS3 106 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 UBE2Q1Q7Z7E8 422 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 PROKR2Q8NFJ6 384 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 PLEKHO2Q8TD55 490 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 NCSTNQ92542 709 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
PTPRU-204ENST00000428026 PAK1IP1Q9NWT1 392 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms