RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 ZNF548Q8NEK5 533 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 PIGBQ92521 554 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM19Q96HH6 336 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TXN2Q99757 166 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 MAP3K3Q99759 626 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 RBM38Q9H0Z9 239 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 ECT2Q9H8V3 914 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 RPF1Q9H9Y2 349 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 OLFML3Q9NRN5 406 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 HIF1ANQ9NWT6 349 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 DAPK2Q9UIK4 370 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 ARID1BQ8NFD5 2236 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SCAF11Q99590 1463 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 LINC01553A4QN01 128 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 ANKDD1BA6NHY2 528 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 C17orf105B2RV13 164 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 F8WDY8 70 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 CLDN3O15551 220 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 RBMXL2O75526 392 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 KDM4BO94953 1096 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 PAPSS2O95340 614 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 GAS8O95995 478 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 CELA2AP08217 269 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 PEX5P50542 639 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 BNC1Q01954 994 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC3A1Q07837 685 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 MYBPHQ13203 477 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TAF1BQ53T94 588 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 HERC4Q5GLZ8 1057 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SPDYCQ5MJ68 293 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 IRGCQ6NXR0 463 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 RAD9BQ6WBX8 426 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 MARK2Q7KZI7 788 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC16A9Q7RTY1 509 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM110Q86TL2 294 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 LONP2Q86WA8 852 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM219Q86XT9 240 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 Q8N1X5 172 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 PRR26Q8N8Z3 221 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 OR10Q1Q8NGQ4 319 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TSACCQ96A04 125 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SCMH1Q96GD3 660 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC39A8Q9C0K1 460 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 TRPC7Q9HCX4 862 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 PHPT1Q9NRX4 125 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 FAM212BQ9NTI7 297 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 DONSONQ9NYP3 566 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 C11orf21Q9P2W6 132 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 RABL2BQ9UNT1 228 aa4.25□□□□□ -1.73
NUDCD1-202ENST00000427660 ZFYVE9O95405 1425 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 A2MP01023 1474 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 ADGRB3O60242 1522 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 CAMSAP1Q5T5Y3 1602 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 KIDINS220Q9ULH0 1771 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 KIAA1217Q5T5P2 1943 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 ZNF197O14709 1029 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 DIRAS3O95661 229 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 KRT6BP04259 564 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 RPS2P15880 293 aaKnown RBP4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 SSTR1P30872 391 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 MMP13P45452 471 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 KRT6CP48668 564 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 FMO5P49326 533 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 MBTD1Q05BQ5 628 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 DMPKQ09013 629 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC25A24Q6NUK1 477 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM139Q8IV31 216 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 NANOGP1Q8N7R0 232 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 LEMD2Q8NC56 503 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 OR11H4Q8NGC9 324 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 PRMT1Q99873 361 aaKnown RBP4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 THUMPD2Q9BTF0 503 aaKnown RBP4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 CCSER1Q9C0I3 900 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 TRPV6Q9H1D0 765 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 RAB9BQ9NP90 201 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 AATFQ9NY61 560 aaKnown RBP eCLIP4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 NUDCQ9Y266 331 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 ZBED9Q6R2W3 1325 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 NSD2O96028 1365 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 NRXN1Q9ULB1 1477 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 PIK3C2BO00750 1634 aa4.24□□□□□ -1.73
NUDCD1-202ENST00000427660 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 ATP6V1G1O75348 118 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 GLUD1P00367 558 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 TMEM191BP0C7N4 346 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 DLATP10515 647 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 HSPA5P11021 654 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 GP1BBP13224 206 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 SCP2P22307 547 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 NSFP46459 744 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 SLC6A12P48065 614 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 GLUD2P49448 558 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 THOP1P52888 689 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 SSTP61278 116 aa4.23□□□□□ -1.73
NUDCD1-202ENST00000427660 PITX1P78337 314 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms