RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 SEMA4CQ9C0C4 833 aa14.97□□□□□ -0.01
CLK3P2-201ENST00000427566 SRPK3Q9UPE1 567 aa14.97□□□□□ -0.01
CLK3P2-201ENST00000427566 PCDHGA6Q9Y5G7 932 aa14.97□□□□□ -0.01
CLK3P2-201ENST00000427566 TMEM120BA0PK00 339 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 SYCE1LA8MT33 242 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 P2RX6O15547 441 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 KLK8O60259 260 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 S100BP04271 92 aaPredicted RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 RBP1P09455 135 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 FURINP09958 794 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 GFAPP14136 432 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 EZRP15311 586 aaKnown RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 VARSP26640 1264 aaKnown RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 BCL6P41182 706 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 GCGRP47871 477 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 NAA25Q14CX7 972 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 TSNAXIP1Q2TAA8 658 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 HKDC1Q2TB90 917 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 FAM69BQ5VUD6 431 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 TMPRSS11BQ86T26 416 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 TCAIMQ8N3R3 496 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 EXD3Q8N9H8 876 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 ABHD11Q8NFV4 315 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 OR4K1Q8NGD4 311 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 ACMSDQ8TDX5 336 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 ZNF473Q8WTR7 871 aaKnown RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 PHF21BQ96EK2 531 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 SSU72Q9NP77 194 aaKnown RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 IFT80Q9P2H3 777 aaPredicted RBP14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 DYRK1BQ9Y463 629 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 CACNA1GO43497 2377 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 SEC16AO15027 2179 aa14.96□□□□□ -0.01
CLK3P2-201ENST00000427566 SIX3O95343 332 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CCR8P51685 355 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SEC24CP53992 1094 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 POLE2P56282 527 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 DCDP81605 110 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 NFKB2Q00653 900 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CDC16Q13042 620 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 GRM7Q14831 915 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SETDB1Q15047 1291 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 TCTE1Q5JU00 501 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 RHBDD2Q6NTF9 364 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 NXPE4Q6UWF7 544 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 FAM198BQ6UWH4 519 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 ZNF517Q6ZMY9 492 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 VN1R4Q7Z5H5 301 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SYVN1Q86TM6 617 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SRRM1Q8IYB3 904 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CNPY4Q8N129 248 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 C4orf33Q8N1A6 199 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 METTL27Q8N6F8 245 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 DPH2Q9BQC3 489 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 NLNQ9BYT8 704 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 KCNK9Q9NPC2 374 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 DNAJC11Q9NVH1 559 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 POLHQ9Y253 713 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 KCNE2Q9Y6J6 123 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 LOC400499M0QZD8 3231 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CCDC189A1A4V9 331 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 EBAG9O00559 213 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 PRPF4O43172 522 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SRPX2O60687 465 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 IPO13O94829 963 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 HRH2P25021 359 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 ARSFP54793 590 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 ALDH18A1P54886 795 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 IL10RAQ13651 578 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 NCF4Q15080 339 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 ZNF385CQ66K41 422 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SLCO4C1Q6ZQN7 724 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 RPS27LQ71UM5 84 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 PTGR2Q8N8N7 351 aaPredicted RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SNX31Q8N9S9 440 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 PROKR1Q8TCW9 393 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 UBTD2Q8WUN7 234 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 APOBEC4Q8WW27 367 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 MOCOSQ96EN8 888 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CHMP6Q96FZ7 201 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SMC6Q96SB8 1091 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 MRPL57Q9BQC6 102 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 MRPL46Q9H2W6 279 aaKnown RBP14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 ACSS2Q9NR19 701 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 CUTCQ9NTM9 273 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 NKIRAS1Q9NYS0 192 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 TCFL5Q9UL49 500 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 EMCNQ9ULC0 261 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 MAN2B2Q9Y2E5 1009 aa14.95□□□□□ -0.02
CLK3P2-201ENST00000427566 SCN3AQ9NY46 2000 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 FITM1A5D6W6 292 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 OR1F1O43749 312 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 RAB40ALP0C0E4 278 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 CREB1P16220 341 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 KRT4P19013 534 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 GNAZP19086 355 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 CD22P20273 847 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 ITGAXP20702 1163 aa14.94□□□□□ -0.02
CLK3P2-201ENST00000427566 CCT5P48643 541 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms