RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 REPS1Q96D71 796 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 ASIC4Q96FT7 647 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 OSMRQ99650 979 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 TFB2MQ9H5Q4 396 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 CRTAC1Q9NQ79 661 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 IMPAD1Q9NX62 359 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 DUSP12Q9UNI6 340 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 DLGAP4Q9Y2H0 992 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 A0A0G2JMZ2 1700 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 TP53BP1Q12888 1972 aaPredicted RBP10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SIGLEC5O15389 551 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC7A4O43246 635 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 CACNG3O60359 315 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 CPSF4O95639 269 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 HRGP04196 525 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SRCP12931 536 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 DNAJB2P25686 324 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 PTPN5P54829 565 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 RUNX1T1Q06455 604 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SIGLEC14Q08ET2 396 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 OR4F3Q6IEY1 312 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF621Q6ZSS3 439 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 OR9Q1Q8NGQ5 310 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 AKAP1Q92667 903 aaKnown RBP eCLIP10.91□□□□□ -0.667e-9■■■■■ 27.4
SEC61A1-202ENST00000424880 FAM167AQ96KS9 214 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 MFSD1Q9H3U5 465 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 NIPAL2Q9H841 368 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF226Q9NYT6 803 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 TAS2R13Q9NYV9 303 aa10.91□□□□□ -0.66
SEC61A1-202ENST00000424880 SMIM28A0A1B0GU29 152 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 J3KTA2 159 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ARNTLO00327 626 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 OR7A17O14581 309 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 CXCL11O14625 94 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 PSMD3O43242 534 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 NPPAP01160 153 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 FPR1P21462 350 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 RHAGQ02094 409 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 C2orf80Q0P641 193 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 GRIK2Q13002 908 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 TAF12Q16514 161 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 WSCD2Q2TBF2 565 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC39A12Q504Y0 691 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 C22orf42Q6IC83 251 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 METTL2BQ6P1Q9 378 aaKnown RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 CCDC149Q6ZUS6 474 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 EIF3MQ7L2H7 374 aaKnown RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 GOLGA7Q7Z5G4 137 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 PIANPQ8IYJ0 282 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 HMCESQ96FZ2 354 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 TNIP3Q96KP6 325 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 EBPLQ9BY08 206 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ZNF222Q9UK12 451 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 RIMKLBQ9ULI2 386 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 MYO10Q9HD67 2058 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 IGFBP1P08833 259 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 CD72P21854 359 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ETV1P50549 477 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 LIMK1P53667 647 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 LILRA4P59901 499 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 PSPHP78330 225 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 RPL6Q02878 288 aaKnown RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 GANABQ14697 944 aaKnown RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 MRNIPQ6NTE8 343 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ANKRD54Q6NXT1 300 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 CHMP1BQ7LBR1 199 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 WDR53Q7Z5U6 358 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 DNAJC5GQ8N7S2 189 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 SLC37A3Q8NCC5 494 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 OR4K2Q8NGD2 314 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 NTAN1Q96AB6 310 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ZBED6CLQ96FA7 236 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 COL21A1Q96P44 957 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 WACQ9BTA9 647 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 ASAH2Q9NR71 780 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 MGAT4AQ9UM21 535 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 HSPE1-MOB4S4R3N1 261 aa10.9□□□□□ -0.66
SEC61A1-202ENST00000424880 OR5K4A6NMS3 321 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 MUSKO15146 869 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 NDUFS3O75489 264 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 NCR1O76036 304 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC22A5O76082 557 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 RETP07949 1114 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 MMP2P08253 660 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 HOXA11P31270 313 aaPredicted RBP10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 MAP2K6P52564 334 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 MRPL28Q13084 256 aaKnown RBP10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 RPA4Q13156 261 aa10.9□□□□□ -0.67
SEC61A1-202ENST00000424880 GALEQ14376 348 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms