RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SQLEQ14534 574 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 NAA25Q14CX7 972 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ETFDHQ16134 617 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TYSND1Q2T9J0 566 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 FAM174BQ3ZCQ3 159 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SIRPB2Q5JXA9 342 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 GARNL3Q5VVW2 1013 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 NCBP2-AS2Q69YL0 99 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 IL20RBQ6UXL0 311 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CYP4V2Q6ZWL3 525 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SLC26A11Q86WA9 606 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 LACC1Q8IV20 430 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CLDN19Q8N6F1 224 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TMEM251Q8N6I4 163 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 LINC01555Q8NAE3 123 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 KCTD6Q8NC69 237 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 IPMKQ8NFU5 416 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 OR4K2Q8NGD2 314 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ZC3HAV1LQ96H79 300 aaKnown RBP5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TSGA13Q96PP4 275 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 FAM111AQ96PZ2 611 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TRIB1Q96RU8 372 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 AGPAT1Q99943 283 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CCDC77Q9BR77 488 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ACAT2Q9BWD1 397 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 RAB11FIP5Q9BXF6 653 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 FSD1LQ9BXM9 530 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SLC25A51Q9H1U9 297 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ZDHHC11Q9H8X9 412 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 UTP6Q9NYH9 597 aaKnown RBP5.87□□□□□ -1.47
SDCBP-203ENST00000424270 PSD3Q9NYI0 1048 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SMARCAL1Q9NZC9 954 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SAMD15Q9P1V8 674 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 IMPACTQ9P2X3 320 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 INTUQ9ULD6 942 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 HEY1Q9Y5J3 304 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ARL5AQ9Y689 179 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 A0A0A6YYK5 440 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TRBV11-1A0A0K0K1C0 115 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TMEM191CA6NGB0 347 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 A8MUA0 341 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 SGTAO43765 313 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 GPRIN2O60269 458 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 NRP2O60462 931 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 FKBP9O95302 570 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 IGHG3P01860 377 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 GSTM1P09488 218 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TPBGLP0DKB5 382 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 DPP4P27487 766 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PCK1P35558 622 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 ACVR1BP36896 505 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 RBMXP38159 391 aaKnown RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TRPC1P48995 793 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF136P52737 540 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 DIO3P55073 304 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 WNT3AP56704 352 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 RPS4XP62701 263 aaKnown RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 KCNJ2P63252 427 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 IFI35P80217 286 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 GSTM4Q03013 218 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 GBE1Q04446 702 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 HYAL2Q12891 473 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PAFAH1B3Q15102 231 aaKnown RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PRTGQ2VWP7 1150 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 CCDC183Q5T5S1 534 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 MEI1Q5TIA1 1274 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 KCTD11Q693B1 232 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PPP1R2P3Q6NXS1 205 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 KIAA0408Q6ZU52 694 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 RNF44Q7L0R7 432 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 DCUN1D3Q8IWE4 304 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 ARIH2OSQ8N7S6 290 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 CNTD1Q8N815 330 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 OR2L8Q8NGY9 312 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 SREK1Q8WXA9 508 aaKnown RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TSLPQ969D9 159 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 FATE1Q969F0 183 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 JSRP1Q96MG2 331 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 HS6ST2Q96MM7 605 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 FAM173AQ9BQD7 235 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 DPH7Q9BTV6 452 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 TRIM45Q9H8W5 580 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-203ENST00000424270 IL1RL2Q9HB29 575 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 DEPPQ9NTK1 212 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 ABCF3Q9NUQ8 709 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 ZDHHC3Q9NYG2 299 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 SPRR3Q9UBC9 169 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 RWDD2AQ9UIY3 292 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 CAMK2AQ9UQM7 478 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 LAMP3Q9UQV4 416 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 SCINQ9Y6U3 715 aa5.86□□□□□ -1.47
SDCBP-203ENST00000424270 PKD1L1Q8TDX9 2849 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 A0A0G2JMM0 328 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 A0A1B0GVC2 190 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 A0A1W2PPB8 328 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms