RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ASPGQ86U10 573 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 SPNS2Q8IVW8 549 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 BEST3Q8N1M1 668 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 CCDC120Q96HB5 630 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 CCDC138Q96M89 665 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 CYTH2Q99418 400 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 RBCK1Q9BYM8 510 aa15.25■□□□□ 0.03
COL18A1-205ENST00000423214 UNKQ9C0B0 810 aaKnown RBP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 IARS2Q9NSE4 1012 aaKnown RBP15.25■□□□□ 0.03
COL18A1-205ENST00000423214 KCNE1BA0A087WTH5 132 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 USP27XA6NNY8 438 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 HAUS5O94927 633 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 MLYCDO95822 493 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 MST1P26927 711 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 BCL6P41182 706 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 CA7P43166 264 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 SNRPNP63162 240 aaKnown RBP15.24■□□□□ 0.03
COL18A1-205ENST00000423214 CSNK1G2P78368 415 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 ART3Q13508 389 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 ACER2Q5QJU3 275 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 FCRLBQ6BAA4 426 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
COL18A1-205ENST00000423214 AGTRAPQ6RW13 159 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 RPTNQ6XPR3 784 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 CYHR1Q6ZMK1 362 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 MCEMP1Q8IX19 187 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 GRK7Q8WTQ7 553 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 ITLN2Q8WWU7 325 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-205ENST00000423214 MAGED4Q96JG8 741 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 NAP1L3Q99457 506 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-205ENST00000423214 NDNQ99608 321 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 MACROD1Q9BQ69 325 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 FAM129AQ9BZQ8 928 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 TAS2R13Q9NYV9 303 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 ADAMTS6Q9UKP5 1117 aa15.24■□□□□ 0.03
COL18A1-205ENST00000423214 KLF2Q9Y5W3 355 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-205ENST00000423214 FAM227AF5H4B4 570 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 TTI1O43156 1089 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 CDH1P12830 882 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PRF1P14222 555 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 MAGEA3P43357 314 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 SRSF11Q05519 484 aaKnown RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 NAE1Q13564 534 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 CRYMQ14894 314 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 ABRAXAS2Q15018 415 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 MEP1AQ16819 746 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 CAPN13Q6MZZ7 669 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PAPD4Q6PIY7 484 aaKnown RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 MRGPRGQ86SM5 289 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 ZNF808Q8N4W9 903 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 KCT2Q8NC54 265 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 EEF1AKMT1Q8WVE0 214 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 SLC13A3Q8WWT9 602 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PEX11GQ96HA9 241 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 UTP23Q9BRU9 249 aaKnown RBP15.23■□□□□ 0.03
COL18A1-205ENST00000423214 ATG10Q9H0Y0 220 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PARVBQ9HBI1 364 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 SH2B3Q9UQQ2 575 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 PDE10AQ9Y233 779 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 NAALAD2Q9Y3Q0 740 aa15.23■□□□□ 0.03
COL18A1-205ENST00000423214 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 ZNF860A6NHJ4 632 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 NDUFS4O43181 175 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SLC19A2O60779 497 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 CDC123O75794 336 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-205ENST00000423214 HIST1H2AGP0C0S8 130 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-205ENST00000423214 PGAM1P18669 254 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 HIST1H2ADP20671 130 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 TAS2R50P59544 299 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SKP1P63208 163 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 ACTN3Q08043 901 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-205ENST00000423214 TUBA3CQ13748 450 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 CYP1B1Q16678 543 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SFT2D3Q587I9 215 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 TUBA3EQ6PEY2 450 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 LCTLQ6UWM7 567 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 BNC2Q6ZN30 1099 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SLC26A11Q86WA9 606 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 CRLF3Q8IUI8 442 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 TBC1D19Q8N5T2 526 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SLC5A8Q8N695 610 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 AMER2Q8N7J2 671 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 TMEM178AQ8NBL3 297 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 FAM98AQ8NCA5 519 aaKnown RBP15.22■□□□□ 0.03
COL18A1-205ENST00000423214 M1APQ8TC57 530 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 LINGO1Q96FE5 620 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 HIST1H2AHQ96KK5 128 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 OR1F2PQ96R84 312 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 LPAR4Q99677 370 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 HIST1H2AJQ99878 128 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 HAUS8Q9BT25 410 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 H2AFJQ9BTM1 129 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 SNX12Q9UMY4 172 aa15.22■□□□□ 0.03
COL18A1-205ENST00000423214 PCDHGB6Q9Y5F9 930 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms