RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 AMER3Q8N944 861 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 OR9A4Q8NGU2 314 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 ZCCHC10Q8TBK6 192 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 NEIL2Q969S2 332 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 MACROD1Q9BQ69 325 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 ANKHQ9HCJ1 492 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 ZDHHC18Q9NUE0 388 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 MRPS2Q9Y399 296 aaKnown RBP20.79■□□□□ 0.92
TRAF4-204ENST00000422344 KCNE2Q9Y6J6 123 aa20.79■□□□□ 0.92
TRAF4-204ENST00000422344 TNRC6AQ8NDV7 1962 aaKnown RBP20.79■□□□□ 0.92
TRAF4-204ENST00000422344 TRBC2A0A5B9 178 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 H0YIG0 161 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 LCMT2O60294 686 aaKnown RBP20.78■□□□□ 0.92
TRAF4-204ENST00000422344 HEXBP07686 556 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 ACPPP15309 386 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 CXCR2P25025 360 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 UQCRFS1P47985 274 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 EMP2P54851 167 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 ATP6V0D1P61421 351 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 CATSPEREQ5SY80 951 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 HIST2H2BCQ6DN03 193 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 TMEM214Q6NUQ4 689 aaKnown RBP20.78■□□□□ 0.92
TRAF4-204ENST00000422344 RAPH1Q70E73 1250 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 SPATA6LQ8N4H0 392 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 OR4K1Q8NGD4 311 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 SMAD5Q99717 465 aaKnown RBP20.78■□□□□ 0.92
TRAF4-204ENST00000422344 C5AR2Q9P296 337 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 SLC22A14Q9Y267 594 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 UNC79Q9P2D8 2635 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 MED13Q9UHV7 2174 aa20.78■□□□□ 0.92
TRAF4-204ENST00000422344 NCF1BA6NI72 391 aaPredicted RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NCF1CA8MVU1 366 aaPredicted RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 IDSB3KWA1 339 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 MASP2O00187 686 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NDUFS4O43181 175 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 FAM155BO75949 473 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 IPO13O94829 963 aaKnown RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 WDR47O94967 919 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NSA2O95478 260 aaKnown RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 C1QAP02745 245 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 SERPIND1P05546 499 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NCF1P14598 390 aaPredicted RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 IL1RNP18510 177 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 PHBP35232 272 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 MAT1AQ00266 395 aaKnown RBP20.77■□□□□ 0.92
TRAF4-204ENST00000422344 SYT16Q17RD7 645 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NADK2Q4G0N4 442 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 TMPRSS11BQ86T26 416 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 GPSM1Q86YR5 675 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 TCAIMQ8N3R3 496 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 OR11G2Q8NGC1 345 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 KIF18AQ8NI77 898 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 TM9SF4Q92544 642 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 TM4SF19Q96DZ7 209 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 AIF1LQ9BQI0 150 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 TGIF2Q9GZN2 237 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 PELI2Q9HAT8 420 aa20.77■□□□□ 0.92
TRAF4-204ENST00000422344 NUP210LQ5VU65 1888 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 TTLL8A6PVC2 850 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 ALOX12BO75342 701 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 VPS4BO75351 444 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 WISP3O95389 354 aaPredicted RBP20.76■□□□□ 0.91
TRAF4-204ENST00000422344 S100BP04271 92 aaPredicted RBP20.76■□□□□ 0.91
TRAF4-204ENST00000422344 SOX8P57073 446 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 RGS1Q08116 209 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 EFTUD2Q15029 972 aaKnown RBP eCLIP20.76■□□□□ 0.914e-8■■■■■ 34.9
TRAF4-204ENST00000422344 TGFBIQ15582 683 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 ZKSCAN8Q15776 578 aaPredicted RBP20.76■□□□□ 0.91
TRAF4-204ENST00000422344 LAPTM4BQ86VI4 370 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 EFCAB3Q8N7B9 438 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 KCT2Q8NC54 265 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 NOA1Q8NC60 698 aaKnown RBP20.76■□□□□ 0.91
TRAF4-204ENST00000422344 IFT81Q8WYA0 676 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 RHBDF1Q96CC6 855 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 SARGQ9BW04 601 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 TSPYL1Q9H0U9 437 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 CNOT10Q9H9A5 744 aaKnown RBP20.76■□□□□ 0.91
TRAF4-204ENST00000422344 WWOXQ9NZC7 414 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 VPS4AQ9UN37 437 aa20.76■□□□□ 0.91
TRAF4-204ENST00000422344 PCDH17O14917 1159 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 AGFG2O95081 481 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 HPP00738 406 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 CD1DP15813 335 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 GNLYP22749 145 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 CRABP2P29373 138 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 SKP1P63208 163 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 PWP1Q13610 501 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 GLE1Q53GS7 698 aaKnown RBP20.75■□□□□ 0.91
TRAF4-204ENST00000422344 MFSD4BQ5TF39 518 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 FAAH2Q6GMR7 532 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 NXPE4Q6UWF7 544 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 TBC1D1Q86TI0 1168 aaPredicted RBP20.75■□□□□ 0.91
TRAF4-204ENST00000422344 ZC3H7AQ8IWR0 971 aaKnown RBP20.75■□□□□ 0.91
TRAF4-204ENST00000422344 PARP9Q8IXQ6 854 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 C8orf44Q96CB5 159 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 MRRFQ96E11 262 aaKnown RBP20.75■□□□□ 0.91
TRAF4-204ENST00000422344 MFRPQ9BY79 579 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 CD274Q9NZQ7 290 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 HCN3Q9P1Z3 774 aa20.75■□□□□ 0.91
TRAF4-204ENST00000422344 ZFP69BQ9UJL9 534 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms