RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 WDR20Q8TBZ3 569 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 CCT6BQ92526 530 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 UBE2E3Q969T4 207 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 RERGQ96A58 199 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 ZNF501Q96CX3 271 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 MAGEB10Q96LZ2 347 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 FRG2BQ96QU4 278 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 PITHD1Q9GZP4 211 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 ELOVL6Q9H5J4 265 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 NT5DC2Q9H857 520 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 FANCEQ9HB96 536 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 IRAK4Q9NWZ3 460 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 AKAP7Q9P0M2 348 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 MARCOQ9UEW3 520 aaPredicted RBP15.01□□□□□ -0.01
DDX55-203ENST00000421670 ZFP69BQ9UJL9 534 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 RAP2CQ9Y3L5 183 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 AP1M2Q9Y6Q5 423 aa15.01□□□□□ -0.01
DDX55-203ENST00000421670 CELSR3Q9NYQ7 3312 aa15□□□□□ -0.01
DDX55-203ENST00000421670 CCDC187A0A096LP49 1063 aa15□□□□□ -0.01
DDX55-203ENST00000421670 ANKDD1BA6NHY2 528 aa15□□□□□ -0.01
DDX55-203ENST00000421670 TCP11X1B4DZS4 312 aa15□□□□□ -0.01
DDX55-203ENST00000421670 MANBAO00462 879 aa15□□□□□ -0.01
DDX55-203ENST00000421670 SH3BGRLO75368 114 aa15□□□□□ -0.01
DDX55-203ENST00000421670 PDYNP01213 254 aa15□□□□□ -0.01
DDX55-203ENST00000421670 MSL3P1P0C860 447 aa15□□□□□ -0.01
DDX55-203ENST00000421670 UROSP10746 265 aa15□□□□□ -0.01
DDX55-203ENST00000421670 AHRP35869 848 aa15□□□□□ -0.01
DDX55-203ENST00000421670 ETV5P41161 510 aa15□□□□□ -0.01
DDX55-203ENST00000421670 ACY1Q03154 408 aa15□□□□□ -0.01
DDX55-203ENST00000421670 IFT88Q13099 833 aa15□□□□□ -0.01
DDX55-203ENST00000421670 SCIMPQ6UWF3 145 aa15□□□□□ -0.01
DDX55-203ENST00000421670 ASPGQ86U10 573 aa15□□□□□ -0.01
DDX55-203ENST00000421670 GALNT15Q8N3T1 639 aa15□□□□□ -0.01
DDX55-203ENST00000421670 CSNK1A1LQ8N752 337 aa15□□□□□ -0.01
DDX55-203ENST00000421670 PMEPA1Q969W9 287 aa15□□□□□ -0.01
DDX55-203ENST00000421670 REPS1Q96D71 796 aa15□□□□□ -0.01
DDX55-203ENST00000421670 CTRCQ99895 268 aa15□□□□□ -0.01
DDX55-203ENST00000421670 ILKAPQ9H0C8 392 aaPredicted RBP15□□□□□ -0.01
DDX55-203ENST00000421670 RHBGQ9H310 441 aa15□□□□□ -0.01
DDX55-203ENST00000421670 PNPOQ9NVS9 261 aa15□□□□□ -0.01
DDX55-203ENST00000421670 SNX6Q9UNH7 406 aa15□□□□□ -0.01
DDX55-203ENST00000421670 SATB2Q9UPW6 733 aa15□□□□□ -0.01
DDX55-203ENST00000421670 TRAF6Q9Y4K3 522 aa15□□□□□ -0.01
DDX55-203ENST00000421670 PTGDR2Q9Y5Y4 395 aa15□□□□□ -0.01
DDX55-203ENST00000421670 MAGEB17A8MXT2 336 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 H3BMH7 237 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
DDX55-203ENST00000421670 OR2B3O76000 313 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 TBX6O95947 436 aaPredicted RBP14.99□□□□□ -0.01
DDX55-203ENST00000421670 SLC35G6P0C7Q6 338 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 KITP10721 976 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 ABRAXAS2Q15018 415 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 WASHC2DQ5SRD0 308 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 RGS9BPQ6ZS82 235 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 TMPRSS7Q7RTY8 843 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 TTLQ8NG68 377 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 CREB3L4Q8TEY5 395 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 ZNF473Q8WTR7 871 aaKnown RBP14.99□□□□□ -0.01
DDX55-203ENST00000421670 SLC13A3Q8WWT9 602 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 SELENOMQ8WWX9 145 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 SPRTNQ9H040 489 aaPredicted RBP14.99□□□□□ -0.01
DDX55-203ENST00000421670 DMRT3Q9NQL9 472 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 PISDQ9UG56 409 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 HAO1Q9UJM8 370 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 DNAJC15Q9Y5T4 150 aa14.99□□□□□ -0.01
DDX55-203ENST00000421670 PLD2O14939 933 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 SRPX2O60687 465 aaPredicted RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 SNUPNO95149 360 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 TIAF1O95411 115 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 KRT6AP02538 564 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 KRT6BP04259 564 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 JUNP05412 331 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 FGF4P08620 206 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 JMJD7P0C870 316 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 ID4P47928 161 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 KRT6CP48668 564 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 RPL14P50914 215 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 MAPK10P53779 464 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 ITGA1P56199 1179 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 RPS13P62277 151 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 SNRPNP63162 240 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 FOXC1Q12948 553 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 PRAMEF17Q5VTA0 474 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 CLYBLQ8N0X4 340 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 KCT2Q8NC54 265 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 TRPV3Q8NET8 790 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 TWIST2Q8WVJ9 160 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 USP7Q93009 1102 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 TM4SF19Q96DZ7 209 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 THAP11Q96EK4 314 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 C7orf26Q96N11 449 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 ZNF285Q96NJ3 590 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 AICDAQ9GZX7 198 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 CCDC134Q9H6E4 229 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 RUVBL1Q9Y265 456 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 FRYQ5TBA9 3013 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 CACNA1AO00555 2505 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 SDK2Q58EX2 2172 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 POLR1CO15160 346 aaPredicted RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 ZSCAN9O15535 394 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms