RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TAAR9Q96RI9 348 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 DDA1Q9BW61 102 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 NLNQ9BYT8 704 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 ASPSCR1Q9BZE9 553 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 NRSN2Q9GZP1 204 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 MANSC1Q9H8J5 431 aa16.75■□□□□ 0.27
LINC00271-201ENST00000421378 TXNDC9O14530 226 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 P2RX6O15547 441 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 CRCPO75575 148 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 TNFSF15O95150 251 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 HSPA4LO95757 839 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 STATHP02808 62 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 SERPIND1P05546 499 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 CAPN1P07384 714 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 ABCE1P61221 599 aaKnown RBP16.74■□□□□ 0.27
LINC00271-201ENST00000421378 BST1Q10588 318 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 STX3Q13277 289 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00271-201ENST00000421378 FRG2Q64ET8 278 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 ATG16L1Q676U5 607 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 TMEM126BQ8IUX1 230 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 CAMKVQ8NCB2 501 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 METTL6Q8TCB7 284 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 TEFMQ96QE5 360 aaKnown RBP16.74■□□□□ 0.27
LINC00271-201ENST00000421378 FRG2BQ96QU4 278 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 ZPBPQ9BS86 351 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 SLC29A3Q9BZD2 475 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 SPRTNQ9H040 489 aaPredicted RBP16.74■□□□□ 0.27
LINC00271-201ENST00000421378 RHBGQ9H310 441 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 ELOVL6Q9H5J4 265 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 ENAMQ9NRM1 1142 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 STARD5Q9NSY2 213 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 SNX6Q9UNH7 406 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 NEUROG3Q9Y4Z2 214 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 B3GALT1Q9Y5Z6 326 aa16.74■□□□□ 0.27
LINC00271-201ENST00000421378 SCRG1O75711 98 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 SNUPNO95149 360 aaKnown RBP16.73■□□□□ 0.27
LINC00271-201ENST00000421378 TIAF1O95411 115 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 HMOX2P30519 316 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 SERPINB1P30740 379 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 SLC1A6P48664 564 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 PHEXP78562 749 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 RGS1Q08116 209 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 IFT88Q13099 833 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 PWP1Q13610 501 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 DDX39BQ13838 428 aaKnown RBP16.73■□□□□ 0.27
LINC00271-201ENST00000421378 GRM7Q14831 915 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 C10orf62Q5T681 223 aaPredicted RBP16.73■□□□□ 0.27
LINC00271-201ENST00000421378 PWWP2BQ6NUJ5 590 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 HUS1BQ8NHY5 278 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 FAM76AQ8TAV0 307 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 WDR20Q8TBZ3 569 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 CCT6BQ92526 530 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 USP7Q93009 1102 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 TM4SF19Q96DZ7 209 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 SLC46A1Q96NT5 459 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 KCNA7Q96RP8 456 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 MTERF1Q99551 399 aaKnown RBP16.73■□□□□ 0.27
LINC00271-201ENST00000421378 MACROD1Q9BQ69 325 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 TNFRSF12AQ9NP84 129 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 ADGRE2Q9UHX3 823 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 RUVBL1Q9Y265 456 aaKnown RBP16.73■□□□□ 0.27
LINC00271-201ENST00000421378 TSC22D4Q9Y3Q8 395 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 PCDHGA3Q9Y5H0 932 aa16.73■□□□□ 0.27
LINC00271-201ENST00000421378 FITM1A5D6W6 292 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 KLF11O14901 512 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ITM2AO43736 263 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 CLEC3AO75596 197 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 LYPLA1O75608 230 aaPredicted RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 KRT6AP02538 564 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 KRT6BP04259 564 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 RBMS1P29558 406 aaKnown RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 PIK3CBP42338 1070 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 KRT6CP48668 564 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 FOXA1P55317 472 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 PRTGQ2VWP7 1150 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SH2D4BQ5SQS7 431 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 MANEAQ5SRI9 462 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 PRAMEF17Q5VTA0 474 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ATG14Q6ZNE5 492 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 VN1R5Q7Z5H4 357 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 TTC29Q8NA56 475 aaPredicted RBP16.72■□□□□ 0.27
LINC00271-201ENST00000421378 AGR3Q8TD06 166 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 LRRC8CQ8TDW0 803 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 CREB3L4Q8TEY5 395 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 NXPE2Q96DL1 559 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SLC7A5P2Q9GIP4 190 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 C20orf27Q9GZN8 174 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 TIMM22Q9Y584 194 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 PCDHB3Q9Y5E6 796 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ASPMQ8IZT6 3477 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 C9orf172C9J069 976 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 ZNF749O43361 778 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 SERPINA6P08185 405 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 UROSP10746 265 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 NEK2P51955 445 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 RTP5Q14D33 572 aa16.72■□□□□ 0.27
LINC00271-201ENST00000421378 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms