RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SPATA31D1Q6ZQQ2 1576 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 LOC105371242A0A075B767 164 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 A0A087WZ39 114 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 IGHV3-20A0A0C4DH32 117 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 A0A1W2PPW3 197 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 PRSS46E5RG02 174 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 SURF4O15260 269 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 SNAP91O60641 907 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 CYTIPO60759 359 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 NXPH4O95158 308 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 MYOGP15173 224 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 EDNRAP25101 427 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 SFTPDP35247 375 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ETV5P41161 510 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 CETN2P41208 172 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 BTG1P62324 171 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 CD300CQ08708 224 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 TNK1Q13470 666 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 RAPSNQ13702 412 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 RBBP7Q16576 425 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 MTHFSDQ2M296 383 aaKnown RBP3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ALDH1L2Q3SY69 923 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 SPINK14Q6IE38 97 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 TTC27Q6P3X3 843 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 NOTUMQ6P988 496 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 TRAT1Q6PIZ9 186 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 TMEM182Q6ZP80 229 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZFAND4Q86XD8 727 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 CCDC63Q8NA47 563 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 IQUBQ8NA54 791 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 OR5T2Q8NGG2 359 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 CHPT1Q8WUD6 406 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 HEXDCQ8WVB3 486 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 RAD54LQ92698 747 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF577Q9BSK1 485 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 PARLQ9H300 379 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF510Q9Y2H8 683 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 SELENOKQ9Y6D0 94 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 ABCA7Q8IZY2 2146 aa3.62□□□□□ -1.83
HMGB1P49-201ENST00000418882 HCFC1P51610 2035 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 ANXA2P2A6NMY6 339 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 MAGEB2O15479 319 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 DKC1O60832 514 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 FDPSP14324 419 aaKnown RBP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 ADRA2CP18825 462 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 EPORP19235 508 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 AADACP22760 399 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 CLCN4P51793 760 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 DHODHQ02127 395 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF239Q16600 458 aaKnown RBP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 FAM174BQ3ZCQ3 159 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 LRRC73Q5JTD7 316 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 DNAJB7Q7Z6W7 309 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 SLFN11Q7Z7L1 901 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZER1Q7Z7L7 766 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZC3H3Q8IXZ2 948 aaKnown RBP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 METTL4Q8N3J2 472 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 AMER3Q8N944 861 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 C17orf47Q8NEP4 570 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 LRRC15Q8TF66 581 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 MGME1Q9BQP7 344 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 MTHFD2LQ9H903 347 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 LMAN1LQ9HAT1 526 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 IL36AQ9UHA7 158 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 LNPEPQ9UIQ6 1025 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 FBXL4Q9UKA2 621 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 POMT2Q9UKY4 750 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 KLK4Q9Y5K2 254 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 IL16Q14005 1332 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
HMGB1P49-201ENST00000418882 GON4LQ3T8J9 2241 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 A0A087WV48 116 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 H7C0S8 307 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 SLC1A7O00341 560 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 LRCH4O75427 683 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 THEGLP0DJG4 465 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 SPP1P10451 314 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 PDGFRAP16234 1089 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 PSMA3P25788 255 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 PRKCIP41743 596 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 CLDN17P56750 224 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 MS4A2Q01362 244 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF177Q13360 481 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 ATP1A1-AS1Q5TC04 95 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 CHMP1BQ7LBR1 199 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 AMIGO1Q86WK6 493 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 SLC45A3Q96JT2 553 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 FOXN4Q96NZ1 517 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 BAG1Q99933 345 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 RNF121Q9H920 327 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 IARS2Q9NSE4 1012 aaKnown RBP3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 CTSZQ9UBR2 303 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 BAIAP2L1Q9UHR4 511 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 NRBP1Q9UHY1 535 aa3.6□□□□□ -1.83
HMGB1P49-201ENST00000418882 IGHV4-30-2A0A087WSY4 118 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms