RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DNAJB6O75190 326 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 TBX6O95947 436 aaPredicted RBP19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 ALDOAP04075 364 aaKnown RBP19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 VARSP26640 1264 aaKnown RBP19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 MAGEA12P43365 314 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 RRADP55042 308 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 IRF9Q00978 393 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 KLRB1Q12918 225 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 ATG14Q6ZNE5 492 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 PRICKLE2Q7Z3G6 844 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 AMER2Q8N7J2 671 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 CAMKVQ8NCB2 501 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 NT5CQ8TCD5 201 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 CREB3L4Q8TEY5 395 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 IFT81Q8WYA0 676 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 ISL2Q96A47 359 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 FER1L6-AS2Q96M78 137 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 GPR78Q96P69 363 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 FMO2Q99518 471 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC22A7Q9Y694 548 aa19.54■□□□□ 0.72
PKNOX1-202ENST00000418336 NCF1BA6NI72 391 aaPredicted RBP19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 NCF1CA8MVU1 366 aaPredicted RBP19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 J3QKU1 62 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 BMP10O95393 424 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SMIM10L1P0DMW3 83 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 MTHFD2P13995 350 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 NCF1P14598 390 aaPredicted RBP19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 IL1RNP18510 177 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 CRABP2P29373 138 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 E2F2Q14209 437 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SLMAPQ14BN4 828 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 PRSS58Q8IYP2 241 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 GALNT16Q8N428 558 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC44A1Q8WWI5 657 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SMIM10Q96HG1 83 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 CYTH2Q99418 400 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 CRB3Q9BUF7 120 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SLC6A16Q9GZN6 736 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 MKKSQ9NPJ1 570 aaPredicted RBP19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 C14orf105Q9NVL8 296 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 TRPC4Q9UBN4 977 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 ZFP69BQ9UJL9 534 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 C3orf18Q9UK00 162 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 PCDHGB7Q9Y5F8 929 aa19.53■□□□□ 0.72
PKNOX1-202ENST00000418336 SCN3AQ9NY46 2000 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 LOC102723996A0A087X1L8 192 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 A6NL46 340 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 IDSB3KWA1 339 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 SGK494L7N484 410 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 OR1F1O43749 312 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 JRKO75564 520 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 WDR47O94967 919 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 IGHEP01854 428 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 CD22P20273 847 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 AHRP35869 848 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 CD97P48960 835 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 PGDP52209 483 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 OCA2Q04671 838 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 PWP1Q13610 501 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 RAPSNQ13702 412 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 MYBPC3Q14896 1274 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 NDUFA9Q16795 377 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 NADK2Q4G0N4 442 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 MROH9Q5TGP6 573 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 TMEM205Q6UW68 189 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 FRA10AC1Q70Z53 315 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 TMPRSS11BQ86T26 416 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 GPSM1Q86YR5 675 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 RBMXL3Q8N7X1 1067 aaKnown RBP19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 CEP112Q8N8E3 955 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 ESAMQ96AP7 390 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 C8orf44Q96CB5 159 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 NXNL1Q96CM4 212 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 WDR34Q96EX3 536 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 EGFL8Q99944 293 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 TXLNGYQ9BZA5 131 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 TRIM4Q9C037 500 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 ZBTB20Q9HC78 741 aaPredicted RBP19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 SNX15Q9NRS6 342 aa19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 MTRF1LQ9UGC7 380 aaKnown RBP19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 HEMK1Q9Y5R4 338 aaPredicted RBP19.52■□□□□ 0.72
PKNOX1-202ENST00000418336 PABPN1LA6NDY0 278 aaKnown RBP19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 PEX12O00623 359 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 PRPF4O43172 522 aaKnown RBP eCLIP19.51■□□□□ 0.713e-7■■■□□ 19
PKNOX1-202ENST00000418336 SORBS2O94875 1100 aaKnown RBP19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 B3GALT4O96024 378 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 C2P06681 752 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 COX6A1P12074 109 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 TFEBP19484 476 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 GRK3P35626 688 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 HSPA7P48741 367 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 TLE1Q04724 770 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 SULT1C3Q6IMI6 304 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 VN1R5Q7Z5H4 357 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 TCAIMQ8N3R3 496 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 Q8NA96 180 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 ZCCHC10Q8TBK6 192 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 KCTD4Q8WVF5 259 aa19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 MRRFQ96E11 262 aaKnown RBP19.51■□□□□ 0.71
PKNOX1-202ENST00000418336 KLHL31Q9H511 634 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms