RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 CFL2Q9Y281 166 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 PRAMEF33A0A0G2JMD5 474 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 FUOMA2VDF0 154 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 PRAMEF10O60809 474 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 PSKH1P11801 424 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 VBP1P61758 197 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 IPCEF1Q8WWN9 437 aaPredicted RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CWH43Q9H720 699 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 MTMR10Q9NXD2 777 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 MALT1Q9UDY8 824 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SUSD2Q9UGT4 822 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 H3BNC9 293 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 ZNF217O75362 1048 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 IVDP26440 423 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SLBPQ14493 270 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SUZ12Q15022 739 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 HNRNPA1L2Q32P51 320 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 FAM174BQ3ZCQ3 159 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 ZNF404Q494X3 552 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 MINDY4Q4G0A6 757 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CGB2Q6NT52 195 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 ANKRD49Q8WVL7 239 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 MTERF1Q99551 399 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 POU2F1P14859 743 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 TUBA1BP68363 451 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 RPL6Q02878 288 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 RELAQ04206 551 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 LIN54Q6MZP7 749 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 TUBA1AQ71U36 451 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■□□□□ 11.2
SCAF8-203ENST00000417268 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CHST14Q8NCH0 376 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 GLB1L3Q8NCI6 653 aaPredicted RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 ADAMTS15Q8TE58 950 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SLC13A3Q8WWT9 602 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 HLA-CQ95604 372 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 SOX17Q9H6I2 414 aaPredicted RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 UCKL1Q9NWZ5 548 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 MRTO4Q9UKD2 239 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 TESMINQ9Y4I5 508 aa12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CFAP20Q9Y6A4 193 aaKnown RBP12.42□□□□□ -0.42
SCAF8-203ENST00000417268 CPED1A4D0V7 1026 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 SLC30A4O14863 429 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 MYOGP15173 224 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 IL4RP24394 825 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 PLA2G16P53816 162 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 MLLT1Q03111 559 aaPredicted RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 AGTRAPQ6RW13 159 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ZCCHC10Q8TBK6 192 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 LMX1AQ8TE12 382 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TRUB1Q8WWH5 349 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 FNDC11Q9BVV2 318 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 GTPBP2Q9BX10 602 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 SLC22A14Q9Y267 594 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 I3L521 148 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TNFRSF10BO14763 440 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 MID1O15344 667 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 KHDRBS3O75525 346 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 C6P13671 934 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ADRB3P13945 408 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ZNF8P17098 575 aaPredicted RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 SPINT3P49223 89 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 KIAA1161Q6NSJ0 714 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 SLC9B2Q86UD5 537 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TMEM145Q8NBT3 493 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TEFMQ96QE5 360 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 IGLON5A6NGN9 336 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ACOX3O15254 700 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 INMTO95050 263 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 CDK4P11802 303 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ACRV1P26436 265 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 VARSP26640 1264 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ELK4P28324 431 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 CCR10P46092 362 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 ALDH3A2P51648 485 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 CLCN4P51793 760 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 GMFBP60983 142 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 GAREM2Q75VX8 874 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TEX47Q8TBZ9 253 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 TMIGD2Q96BF3 282 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 PDCD10Q9BUL8 212 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 OSER1Q9NX31 292 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 MOCS1Q9NZB8 636 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 NFKBIL1Q9UBC1 381 aaPredicted RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 LOC100130705A0A1B0GUX0 176 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 CDH12P55289 794 aa12.41□□□□□ -0.42
SCAF8-203ENST00000417268 RPS14P62263 151 aaKnown RBP12.41□□□□□ -0.42
SCAF8-203ENST00000417268 NFKB2Q00653 900 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms