RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 VPS35Q96QK1 796 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 RAB40CQ96S21 281 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 HAPLN3Q96S86 360 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 CPNE1Q99829 537 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 VKORC1Q9BQB6 163 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 AIFM2Q9BRQ8 373 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 LRRC1Q9BTT6 524 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 BDH2Q9BUT1 245 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 DPCDQ9BVM2 203 aaPredicted RBP3□□□□□ -1.93
CTDSPL-203ENST00000416688 HDHD5Q9BXW7 423 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ANGPTL4Q9BY76 406 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 TM6SF2Q9BZW4 377 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ROPN1BQ9BZX4 212 aaPredicted RBP3□□□□□ -1.93
CTDSPL-203ENST00000416688 ROGDIQ9GZN7 287 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 DERL2Q9GZP9 239 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 WWP1Q9H0M0 922 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 MAGT1Q9H0U3 335 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 RAB1BQ9H0U4 201 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 SNX25Q9H3E2 840 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 GOLPH3Q9H4A6 298 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 SFXN1Q9H9B4 322 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 SLC38A10Q9HBR0 1119 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 LRRC4Q9HBW1 653 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 BPIFA1Q9NP55 256 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ZNF302Q9NR11 478 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 GPR173Q9NS66 373 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3□□□□□ -1.93
CTDSPL-203ENST00000416688 HIF1ANQ9NWT6 349 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 MTMR10Q9NXD2 777 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 MTCH1Q9NZJ7 389 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ADAM22Q9P0K1 906 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 STOX2Q9P2F5 926 aaPredicted RBP3□□□□□ -1.93
CTDSPL-203ENST00000416688 PSMC3IPQ9P2W1 217 aaPredicted RBP3□□□□□ -1.93
CTDSPL-203ENST00000416688 IMPACTQ9P2X3 320 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ENPP5Q9UJA9 477 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 ZFP69BQ9UJL9 534 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 GGA2Q9UJY4 613 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 AMFRQ9UKV5 643 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 PCDHA7Q9UN72 937 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 PCDHA12Q9UN75 941 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 FLVCR2Q9UPI3 526 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 SAMHD1Q9Y3Z3 626 aaKnown RBP3□□□□□ -1.93
CTDSPL-203ENST00000416688 NFE2L3Q9Y4A8 694 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 TAF6LQ9Y6J9 622 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 STON1Q9Y6Q2 735 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 FHAD1B1AJZ9 1412 aa3□□□□□ -1.93
CTDSPL-203ENST00000416688 FANCIQ9NVI1 1328 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 A0A087X0K7 114 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 A0A0U1RRA0 63 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 LOC390937A0A1W2PQ73 354 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CPED1A4D0V7 1026 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 MGAT4DA6NG13 374 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 GOLGA6L10A6NI86 522 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 WASH4PA8MWX3 477 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CXorf49A8MYA2 514 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 BTBD19C9JJ37 291 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 NPIPB11E5RHQ5 1161 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 H0YGN5 161 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 M0QZQ0 153 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 M0R082 166 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 WWP2O00308 870 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 FBP2O00757 339 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 AIM2O14862 343 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 GPAA1O43292 621 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 TLX3O43711 291 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 DUX1O43812 170 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 IDH3BO43837 385 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 PMPCBO75439 489 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 GMNNO75496 209 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 UPK3AO75631 287 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 FARP2O94887 1054 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 NSA2O95478 260 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 H6PDO95479 791 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CBX6O95503 412 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CPNE6O95741 557 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ASS1P00966 412 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 IL6P05231 212 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 FCER2P06734 321 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CRYGBP07316 175 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 C8AP07357 584 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ERCC1P07992 297 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ANXA5P08758 320 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ANKRD34CP0C6C1 535 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 FAM87AP0C7U9 286 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 DANCRP0C864 163 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 SAGP10523 405 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 NR2F6P10588 404 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 MLNP12872 115 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 NQO2P16083 231 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ACADSP16219 412 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 HOXB8P17481 243 aaPredicted RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ITGB6P18564 788 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 POLR2EP19388 210 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CD72P21854 359 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 CFL1P23528 166 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 ACKR3P25106 362 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 AZGP1P25311 298 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 RPL13P26373 211 aaKnown RBP2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 GIFP27352 417 aa2.99□□□□□ -1.93
CTDSPL-203ENST00000416688 FEN1P39748 380 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms