RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 MSRB3Q8IXL7 192 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 ZCCHC7Q8N3Z6 543 aaKnown RBP13□□□□□ -0.33
SSR4P1-201ENST00000415143 FAM47BQ8NA70 645 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 OR5K1Q8NHB7 308 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 HUS1BQ8NHY5 278 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 FBXO30Q8TB52 745 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 AURKBQ96GD4 344 aaPredicted RBP13□□□□□ -0.33
SSR4P1-201ENST00000415143 PYURFQ96I23 114 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 OR4K3Q96R72 315 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 REXO4Q9GZR2 422 aaKnown RBP13□□□□□ -0.33
SSR4P1-201ENST00000415143 PELI2Q9HAT8 420 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
SSR4P1-201ENST00000415143 CLEC1BQ9P126 229 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 ATP6V1HQ9UI12 483 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 DMTF1Q9Y222 760 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 ASF1AQ9Y294 204 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 MYOFQ9NZM1 2061 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 PIKFYVEQ9Y2I7 2098 aa13□□□□□ -0.33
SSR4P1-201ENST00000415143 PKD1L2Q7Z442 2459 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PDLIM1O00151 329 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PCDH7O60245 1069 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PRAMEF4O60810 478 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PCDH8O95206 1070 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 CPSF4O95639 269 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 NPPBP16860 134 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 ENGP17813 658 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 FCARP24071 287 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TACR1P25103 407 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 ACADLP28330 430 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 SOX11P35716 441 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 GZMMP51124 257 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 RAD23AP54725 363 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 YBX1P67809 324 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 VAC14Q08AM6 782 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 ZNF763Q0D2J5 394 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 DYNC1I2Q13409 638 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TOP3AQ13472 1001 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TSTA3Q13630 321 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PUM1Q14671 1186 aaKnown RBP eCLIP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PON2Q15165 354 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TEAD4Q15561 434 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 CNPY1Q3B7I2 92 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 PRAMEF9Q5VWM5 478 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 ZNF776Q68DI1 518 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 SLC30A9Q6PML9 568 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 IKBIPQ70UQ0 350 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 OXR1Q8N573 874 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 C1orf52Q8N6N3 182 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 CDC26Q8NHZ8 85 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 ZFAND2BQ8WV99 257 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 NEIL2Q969S2 332 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TBC1D20Q96BZ9 403 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 COQ8BQ96D53 544 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 RAB11FIP5Q9BXF6 653 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 EBPLQ9BY08 206 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TRIM4Q9C037 500 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 TRIT1Q9H3H1 467 aaKnown RBP12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 NT5DC2Q9H857 520 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 AASDHPPTQ9NRN7 309 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 USE1Q9NZ43 259 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
SSR4P1-201ENST00000415143 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 E2F6O75461 281 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 PRKD3O94806 890 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 PGM3O95394 542 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 SERPINA1P01009 418 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 TFAP2AP05549 437 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 THRBP10828 461 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 ATP6V1B1P15313 513 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 HOXB9P17482 250 aaPredicted RBP12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CDH2P19022 906 aaPredicted RBP12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CD22P20273 847 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 ARSFP54793 590 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 TPD52P55327 224 aaPredicted RBP12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 RPS13P62277 151 aaKnown RBP12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 PHC1P78364 1004 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CDK3Q00526 305 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 TAP2Q03519 686 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 SGCGQ13326 291 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CST6Q15828 149 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 UGT8Q16880 541 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 VMACQ2NL98 169 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CCSMST1Q4G0I0 132 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 PIP5KL1Q5T9C9 394 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CRTC3Q6UUV7 619 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 PAGE2Q7Z2X7 111 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 SLC30A8Q8IWU4 369 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 CHPFQ8IZ52 775 aa12.98□□□□□ -0.33
SSR4P1-201ENST00000415143 OR7A2PQ8NGA2 310 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms