RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TMEM26Q6ZUK4 368 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CBLL1Q75N03 491 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 RAB11FIP2Q7L804 512 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 NLRP9Q7RTR0 991 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 PIM3Q86V86 326 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 VRK3Q8IV63 474 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 DENND6AQ8IWF6 608 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 LMNTD1Q8N9Z9 388 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 OR10G6Q8NH81 332 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 HM13Q8TCT9 377 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.73□□□□□ -1.651e-6■■■■□ 20.6
VPS41-205ENST00000414632 TBC1D20Q96BZ9 403 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CFAP36Q96G28 342 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 ZNF514Q96K75 400 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 SIGLEC10Q96LC7 697 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TGM7Q96PF1 710 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 DIRC2Q96SL1 478 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CTRCQ99895 268 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CCM2Q9BSQ5 444 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 HGH1Q9BTY7 390 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 KIFC1Q9BW19 673 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 STRADBQ9C0K7 418 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 C11orf54Q9H0W9 315 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 L2HGDHQ9H9P8 463 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 POLR1BQ9H9Y6 1135 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 XAB2Q9HCS7 855 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 SLAMF7Q9NQ25 335 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 FBXO6Q9NRD1 293 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 OCIAD1Q9NX40 245 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 PCYOX1Q9UHG3 505 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 RALYQ9UKM9 306 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 PLAGL1Q9UM63 463 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CHMP2BQ9UQN3 213 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 RUVBL2Q9Y230 463 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 CRYL1Q9Y2S2 319 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TDRKHQ9Y2W6 561 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 RPS6KL1Q9Y6S9 549 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 PCM1Q15154 2024 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 KNTC1P50748 2209 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 APC2O95996 2303 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZNF503-AS2A6NEH8 195 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PRSS29PA6NIE9 313 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SDR42E2A6NKP2 422 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 OR5K4A6NMS3 321 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 EFCAB7A8K855 629 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 EFCAB8A8MWE9 144 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CCDC188H7C350 402 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 NIPSNAP2O75323 286 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 RASSF9O75901 435 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 URI1O94763 535 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 MATN4O95460 622 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SBK3P0C264 359 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ERVK-10P10266 1014 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 THRAP10827 490 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ALOX15P16050 662 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZNF28P17035 718 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 POLR2CP19387 275 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 PSMA3P25788 255 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 IVDP26440 423 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ITPKBP27987 946 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 RBMS1P29558 406 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 CCKBRP32239 447 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CCR7P32248 378 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 EIF2S3P41091 472 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 CASRP41180 1078 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ELK3P41970 407 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SLC1A2P43004 574 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 MAGEA3P43357 314 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CAPZBP47756 277 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 KCNJ5P48544 419 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ALDH9A1P49189 494 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 TTPAP49638 278 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PGGT1BP53609 377 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 LIMK2P53671 638 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CDK16Q00536 496 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZFP36L1Q07352 338 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 HSPA14Q0VDF9 509 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ABRQ12979 859 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SP140Q13342 867 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 THOC5Q13769 683 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 ITIH4Q14624 930 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 FASTKD3Q14CZ7 662 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 TRADDQ15628 312 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ANKRD20A4Q4UJ75 823 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZNF658BQ4V348 819 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 HSP90AA5PQ58FG0 334 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CTSL3PQ5NE16 218 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZNF470Q6ECI4 717 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PTRHD1Q6GMV3 140 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 KIAA0930Q6ICG6 404 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 CAPRIN2Q6IMN6 1127 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 TMEM71Q6P5X7 295 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PACS1Q6VY07 963 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CERS6Q6ZMG9 384 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CENPUQ71F23 418 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 TAX1BP1Q86VP1 789 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms