RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CNOT10Q9H9A5 744 aaKnown RBP10.64□□□□□ -0.71
RFFL-204ENST00000414419 ZDHHC18Q9NUE0 388 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 WWOXQ9NZC7 414 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 C5AR2Q9P296 337 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 HS3ST3B1Q9Y662 390 aa10.64□□□□□ -0.71
RFFL-204ENST00000414419 RP1L1Q8IWN7 2480 aaPredicted RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 URADA6NGE7 173 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 TTLL8A6PVC2 850 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 IDSB3KWA1 339 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 NDUFS4O43181 175 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 FAM155BO75949 473 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 CD1DP15813 335 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 IL1RNP18510 177 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 GNAZP19086 355 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CRABP2P29373 138 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 AHRP35869 848 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CSRP3P50461 194 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 SOX8P57073 446 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 MAT1AQ00266 395 aaKnown RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 PWP1Q13610 501 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 HERC3Q15034 1050 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 RBBP5Q15291 538 aaKnown RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 UAP1Q16222 522 aaPredicted RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 SYT16Q17RD7 645 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 FAAH2Q6GMR7 532 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 SULT1C3Q6IMI6 304 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 TMEM214Q6NUQ4 689 aaKnown RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 NIPAL1Q6NVV3 410 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 NXPE4Q6UWF7 544 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 TMPRSS11BQ86T26 416 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 LAPTM4BQ86VI4 370 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 PARP9Q8IXQ6 854 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 ARHGEF39Q8N4T4 335 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CEP112Q8N8E3 955 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 AMER3Q8N944 861 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 KCT2Q8NC54 265 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 OR11G2Q8NGC1 345 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 METTL21AQ8WXB1 218 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 RHBDF1Q96CC6 855 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CYTH2Q99418 400 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 SARGQ9BW04 601 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 TGIF2Q9GZN2 237 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CLMPQ9H6B4 373 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 PELI2Q9HAT8 420 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 NMRAL1Q9HBL8 299 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 SLAMF7Q9NQ25 335 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 CD274Q9NZQ7 290 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 ZFP69BQ9UJL9 534 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 MKL2Q9ULH7 1088 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 RNF112Q9ULX5 631 aa10.63□□□□□ -0.71
RFFL-204ENST00000414419 MRPS2Q9Y399 296 aaKnown RBP10.63□□□□□ -0.71
RFFL-204ENST00000414419 NSG1A0A0A6YYJ2 146 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 SGK494L7N484 410 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 MASP2O00187 686 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 PCDH17O14917 1159 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 CLGNO14967 610 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 ALOX12BO75342 701 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 WISP3O95389 354 aaPredicted RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 HPP00738 406 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 C1QAP02745 245 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 UQCRHP07919 91 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 GDF5P43026 501 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 XCR1P46094 333 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 EFTUD2Q15029 972 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFFL-204ENST00000414419 ZKSCAN8Q15776 578 aaPredicted RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 MINDY4Q4G0A6 757 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 NADK2Q4G0N4 442 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 CDKL4Q5MAI5 379 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 AGAP7PQ5VUJ5 663 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 ABHD13Q7L211 337 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 NDUFAF7Q7L592 441 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 CMC1Q7Z7K0 106 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 KRT78Q8N1N4 520 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 ZADH2Q8N4Q0 377 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 NOA1Q8NC60 698 aaKnown RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 ZNF740Q8NDX6 193 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 TRPV3Q8NET8 790 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 OR51Q1Q8NH59 317 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 STAG3L4Q8TBR4 150 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 EXT2Q93063 718 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 KIAA1191Q96A73 305 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 C8orf44Q96CB5 159 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 THOC3Q96J01 351 aaKnown RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 UBXN10Q96LJ8 280 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 AGAP4Q96P64 663 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 FMO2Q99518 471 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 LHPPQ9H008 270 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 ZNF552Q9H707 407 aaPredicted RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 PRM3Q9NNZ6 103 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 HCN3Q9P1Z3 774 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 DMGDHQ9UI17 866 aaKnown RBP10.62□□□□□ -0.71
RFFL-204ENST00000414419 ACOT9Q9Y305 439 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 NAALAD2Q9Y3Q0 740 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 SLC22A7Q9Y694 548 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 IKBKGQ9Y6K9 419 aa10.62□□□□□ -0.71
RFFL-204ENST00000414419 A0A087X1B8 175 aa10.61□□□□□ -0.71
RFFL-204ENST00000414419 STK16O75716 305 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms