RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CTR9Q6PD62 1173 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 Q6ZRP5 223 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 FCRLAQ7L513 359 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PTAR1Q7Z6K3 402 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 GLRX5Q86SX6 157 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 MAPK15Q8TD08 544 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 SMAP2Q8WU79 429 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 METTL21AQ8WXB1 218 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PYCR2Q96C36 320 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 LINC00479Q96M42 142 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 GBP5Q96PP8 586 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 KLHL5Q96PQ7 755 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 NDNQ99608 321 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 SYT15Q9BQS2 421 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 LMAN1LQ9HAT1 526 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 RAVER2Q9HCJ3 691 aaKnown RBP3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PKD2L2Q9NZM6 624 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PRDM4Q9UKN5 801 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PPP1R3CQ9UQK1 317 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 MYO3AQ8NEV4 1616 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 NEURL4Q96JN8 1562 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PLA2R1Q13018 1463 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PLEKHH2Q8IVE3 1493 aa3.28□□□□□ -1.88
HMGB1P11-201ENST00000413899 PLCH2O75038 1416 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 KIAA1107Q9UPP5 1409 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRAPPC8Q9Y2L5 1435 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SETD1AO15047 1707 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ANKRD30BQ9BXX2 1392 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 A0A1W2PR80 420 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SNURFLB1AK76 121 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 F8VVB4 439 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 F8VWA3 439 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 CCL24O00175 119 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRAF2O60831 178 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 NXPH2O95156 264 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 C9P02748 559 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 FAM58BPP0C7Q3 252 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF883P0CG24 379 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 RPL35AP18077 110 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SP100P23497 879 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ELAVL4P26378 380 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 CETN2P41208 172 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 CRKLP46109 303 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR3A2P47893 321 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 CLK1P49759 484 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 GSCP56915 257 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 PTENP60484 403 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SULT2A1Q06520 285 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SGCGQ13326 291 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 PTPN14Q15678 1187 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TAB1Q15750 504 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 LBHQ53QV2 105 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 LRRC73Q5JTD7 316 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 WLSQ5T9L3 541 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TXNRD3NBQ6F5E7 133 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 FAM166AQ6J272 317 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRIM65Q6PJ69 517 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SPATA21Q7Z572 469 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 GPR141Q7Z602 305 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 KRT77Q7Z794 578 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 GPC2Q8N158 579 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 NKAIN3Q8N8D7 197 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SLC26A7Q8TE54 656 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 DEPDC1BQ8WUY9 529 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 HEXDCQ8WVB3 486 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SLCO2A1Q92959 643 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 CENPTQ96BT3 561 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 MOCOSQ96EN8 888 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 NSMCE3Q96MG7 304 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 NECTIN4Q96NY8 510 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 BTBD9Q96Q07 612 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF300Q96RE9 604 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 MCRIP2Q9BUT9 160 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TDRD1Q9BXT4 1180 aaKnown RBP3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 FGFBP2Q9BYJ0 223 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 SNX25Q9H3E2 840 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 IL36AQ9UHA7 158 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ASIC3Q9UHC3 531 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ANGPTL3Q9Y5C1 460 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 RNF215Q9Y6U7 377 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 KIF1BO60333 1816 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 NOTCH4Q99466 2003 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ATP10AO60312 1499 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 RALGAPBQ86X10 1494 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ERBINQ96RT1 1412 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 ANKRD50Q9ULJ7 1429 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 PREX1Q8TCU6 1659 aa3.27□□□□□ -1.89
HMGB1P11-201ENST00000413899 TSPOAP1O95153 1857 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 SYNMO15061 1565 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 REREQ9P2R6 1566 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 ADGRB3O60242 1522 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 LMTK2Q8IWU2 1503 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 IGLV7-46A0A075B6I9 117 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 MTMR11A4FU01 709 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TMEM150CB9EJG8 249 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms