RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	KIAA0754	O94854	1291 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TIAF1	O95411	115 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	SERPIND1	P05546	499 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	DHRS4L1	P0CG22	281 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TSPAN8	P19075	237 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	CD22	P20273	847 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	SERPINB1	P30740	379 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	ARSF	P54793	590 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	EMP3	P54852	163 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	PKNOX1	P55347	436 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	RGS1	Q08116	209 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	PWP1	Q13610	501 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	MPP2	Q14168	576 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	PRTG	Q2VWP7	1150 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	FAM214A	Q32MH5	1076 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TBC1D25	Q3MII6	688 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	GGTA1P	Q4G0N0	100 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	MANEA	Q5SRI9	462 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	GPRIN3	Q6ZVF9	776 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	VN1R4	Q7Z5H5	301 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	OR4F6	Q8NGB9	312 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	MGARP	Q8TDB4	240 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	SLC13A3	Q8WWT9	602 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	CLIP3	Q96DZ5	547 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	CNDP1	Q96KN2	507 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	CDK15	Q96Q40	435 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TRMO	Q9BU70	441 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	GATA5	Q9BWX5	397 aa	Predicted RBP	12.56	□□□□□ -0.4
SF1-206	ENST00000413725	ACSS2	Q9NR19	701 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	STARD5	Q9NSY2	213 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TXLNG	Q9NUQ3	528 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	FOXJ2	Q9P0K8	574 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	ADGRE2	Q9UHX3	823 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	RNF11	Q9Y3C5	154 aa		12.56	□□□□□ -0.4
SF1-206	ENST00000413725	TPR	P12270	2363 aa	Known RBP	12.56	□□□□□ -0.4
SF1-206	ENST00000413725	HYKK	A2RU49	373 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	WDR91	A4D1P6	747 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	FITM1	A5D6W6	292 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	URAD	A6NGE7	173 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725		H0YIV9	168 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	STMND1	H3BQB6	276 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	P2RX6	O15547	441 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	NDUFS4	O43181	175 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	NPHS1	O60500	1241 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	ENO1	P06733	434 aa	Known RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CTSB	P07858	339 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	PCNA	P12004	261 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	SERPINB5	P36952	375 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CYP4F2	P78329	520 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	NDUFA9	Q16795	377 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	MUM1	Q2TAK8	710 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	HKDC1	Q2TB90	917 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	C10orf62	Q5T681	223 aa	Predicted RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	GARNL3	Q5VVW2	1013 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	TTC19	Q6DKK2	380 aa	Predicted RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	LAS2	Q8IYD9	372 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	PIP4P2	Q8N4L2	257 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	ANKRD53	Q8N9V6	530 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	PROKR1	Q8TCW9	393 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CCT6B	Q92526	530 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	GATA6	Q92908	595 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	TM4SF19	Q96DZ7	209 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	MOCOS	Q96EN8	888 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	RHBG	Q9H310	441 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CCDC86	Q9H6F5	360 aa	Known RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	SYNPO2L	Q9H987	977 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	EML4	Q9HC35	981 aa	Known RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	MLXIPL	Q9NP71	852 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	MID1IP1	Q9NPA3	183 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	MED4	Q9NPJ6	270 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CUTC	Q9NTM9	273 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	TRPS1	Q9UHF7	1281 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	ACSL6	Q9UKU0	697 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	RUVBL1	Q9Y265	456 aa	Known RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.55	□□□□□ -0.4
SF1-206	ENST00000413725	NUP210L	Q5VU65	1888 aa		12.55	□□□□□ -0.4
SF1-206	ENST00000413725	CHD8	Q9HCK8	2581 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	PPP6C	O00743	305 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	CRCP	O75575	148 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	CLEC3A	O75596	197 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	OR4F21	O95013	312 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ESRRB	O95718	433 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	DLGAP3	O95886	979 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	STATH	P02808	62 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	NTRK1	P04629	796 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	KLK3	P07288	261 aa	Predicted RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	SERPINA6	P08185	405 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ZNF28	P17035	718 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	WDR4	P57081	412 aa	Known RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	PCBP4	P57723	403 aa	Known RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	STXBP1	P61764	594 aa	Known RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	PPP2R2A	P63151	447 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	IFT88	Q13099	833 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	DDX39B	Q13838	428 aa	Known RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	MAP7	Q14244	749 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	RCN2	Q14257	317 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ZRSR2	Q15696	482 aa	Known RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	CHI3L2	Q15782	390 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	PRAMEF17	Q5VTA0	474 aa		12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms