RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RAD18Q9NS91 495 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 WBP11Q9Y2W2 641 aaKnown RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CAB39Q9Y376 341 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 ZNF840PA6NDX5 716 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 EFCAB10A6NFE3 127 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 H7C4K7 107 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 GFRA2O00451 464 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 UGDHO60701 494 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CLDN7O95471 211 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 KRT75O95678 551 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HIST1H2AGP0C0S8 130 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HIST1H2ADP20671 130 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HNF1BP35680 557 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HTR3AP46098 478 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 SELENOWP63302 87 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 ELOAQ14241 798 aaKnown RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 SAPCD2Q86UD0 394 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CYP4Z2PQ8N1L4 340 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 ST13P5Q8NFI4 369 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HIST1H2AHQ96KK5 128 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 HIST1H2AJQ99878 128 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 H2AFJQ9BTM1 129 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 DUSP26Q9BV47 211 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 EBPLQ9BY08 206 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 C3orf14Q9HBI5 128 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 CNOT2Q9NZN8 540 aaKnown RBP17.01■□□□□ 0.31
SDCBP-202ENST00000413219 OR51B4Q9Y5P0 310 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 SCN8AQ9UQD0 1980 aa17.01■□□□□ 0.31
SDCBP-202ENST00000413219 C1orf226A1L170 272 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SH3D21A4FU49 640 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SLC16A5O15375 505 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 CAPN5O15484 640 aaPredicted RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 KIAA0513O60268 411 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 MPC1LP0DKB6 136 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 CYBAP13498 195 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 IDH2P48735 452 aaKnown RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 NUDT6P53370 316 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 BCL2L1Q07817 233 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SP140Q13342 867 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 RGNQ15493 299 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 MICAQ29983 383 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SOWAHCQ53LP3 525 aaPredicted RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 CAMKMTQ7Z624 323 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SLC30A2Q9BRI3 323 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 PRDM8Q9NQV8 689 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 TMEM184CQ9NVA4 438 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 VPS29Q9UBQ0 182 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 ENOPH1Q9UHY7 261 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SCAMP2O15127 329 aaKnown RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 PRAMEF4O60810 478 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SOCS5O75159 536 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 UGT2B17O75795 530 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 NUDT7P0C024 238 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 LAMP1P11279 417 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 CD72P21854 359 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 CCR7P32248 378 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 MAPK8P45983 427 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 STARD3Q14849 445 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 ANXA8L1Q5VT79 327 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 PRAMEF9Q5VWM5 478 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 LIPJQ5W064 366 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 TPGS1Q6ZTW0 290 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 NANOGNBQ7Z5D8 188 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 VPS37AQ8NEZ2 397 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 FBXO22Q8NEZ5 403 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 SPPL2AQ8TCT8 520 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 ASB11Q8WXH4 323 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 LINC01599Q8WXQ3 324 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 GKN1Q9NS71 199 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 IMPAD1Q9NX62 359 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 AFF4Q9UHB7 1163 aaKnown RBP17■□□□□ 0.31
SDCBP-202ENST00000413219 ZNF451Q9Y4E5 1061 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 N6AMT1Q9Y5N5 214 aa17■□□□□ 0.31
SDCBP-202ENST00000413219 YY2O15391 372 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 SLITRK5O94991 958 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 ASMTP46597 345 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 CSNK1DP48730 415 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 ALDH9A1P49189 494 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 LRRC74AQ0VAA2 488 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 IFI44LQ53G44 452 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 ATAD3CQ5T2N8 411 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 NLRP8Q86W28 1048 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 LGI4Q8N135 537 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 DCAF4L2Q8NA75 395 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 SH3KBP1Q96B97 665 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 CEP19Q96LK0 163 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 CCM2Q9BSQ5 444 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 ABCG8Q9H221 673 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 DYRK4Q9NR20 520 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 THSD1Q9NS62 852 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 SPATA6Q9NWH7 488 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-202ENST00000413219 STOML2Q9UJZ1 356 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 DUSP12Q9UNI6 340 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
SDCBP-202ENST00000413219 ANKRD34BA5PLL1 514 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 H3BQ06 376 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms