RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 SLC5A8Q8N695 610 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 DNASE1L2Q92874 299 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 COQ8BQ96D53 544 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 GINS4Q9BRT9 223 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 KRCC1Q9NPI7 259 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 ADORA3P0DMS8 318 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 BRCC3P46736 316 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 BCL2L1Q07817 233 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 UGT3A2Q3SY77 523 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 FAM209AQ5JX71 171 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 PM20D1Q6GTS8 502 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 CAPN13Q6MZZ7 669 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 MTMR14Q8NCE2 650 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 PJA1Q8NG27 643 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 DOHHQ9BU89 302 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 CHIAQ9BZP6 476 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 MCUBQ9NWR8 336 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 KLK4Q9Y5K2 254 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 POLR1CO15160 346 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 LYRM1O43325 122 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 OR1E2P47887 323 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 IFITM3Q01628 133 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
CLTCL1-201ENST00000412649 SH3D21A4FU49 640 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 SMIM10L2AP0DMW4 78 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 SMIM10L2BP0DMW5 78 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 CLCN4P51793 760 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 CLCNKBP51801 687 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 UGT8Q16880 541 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 SNX20Q7Z614 316 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 GALNT7Q86SF2 657 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 DNAJC22Q8N4W6 341 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 IL17RDQ8NFM7 739 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 LPPQ93052 612 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 FKBP10Q96AY3 582 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 CREB3L1Q96BA8 519 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 DPH2Q9BQC3 489 aaPredicted RBP13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 MLXQ9UH92 298 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 PSORS1C1Q9UIG5 152 aa13.46□□□□□ -0.26
CLTCL1-201ENST00000412649 SGTAO43765 313 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 NME6O75414 186 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 EPOP01588 193 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 DPEP1P16444 411 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ARNTP27540 789 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 CREB3L2Q70SY1 520 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 OR6F1Q8NGZ6 308 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ZNF607Q96SK3 696 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 NIPAL2Q9H841 368 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 GLTPQ9NZD2 209 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 PDGFAP04085 211 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ACSL1P33121 698 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 GMFBP60983 142 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 TARDBPQ13148 414 aaKnown RBP eCLIP13.45□□□□□ -0.263e-6■■■■□ 20.1
CLTCL1-201ENST00000412649 MFSD10Q14728 455 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 GPRIN1Q7Z2K8 1008 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 TMEM151AQ8N4L1 468 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 B3GNT7Q8NFL0 401 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 TMEM159Q96B96 161 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 CD244Q9BZW8 370 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 NFKBIL1Q9UBC1 381 aaPredicted RBP13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ZNF639Q9UID6 485 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 PRKAB1Q9Y478 270 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 SOX14O95416 240 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 SSTR4P31391 388 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 CLDN8P56748 225 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 KCNC4Q03721 635 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 STX4Q12846 297 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 KDELC1Q6UW63 502 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 FAM20CQ8IXL6 584 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 AP2M1Q96CW1 435 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ACBD6Q9BR61 282 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 SGK2Q9HBY8 427 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
CLTCL1-201ENST00000412649 H3BM21 787 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 OR1I1O60431 355 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 DNASE1P24855 282 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 MAPKAPK2P49137 400 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 STARP49675 285 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 GALEQ14376 348 aa13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
CLTCL1-201ENST00000412649 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms