RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 FAM98AQ8NCA5 519 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GIMAP7Q8NHV1 300 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ZCCHC10Q8TBK6 192 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 FRMD6Q96NE9 622 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SPOCK3Q9BQ16 436 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TSGA10Q9BZW7 698 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ANKHQ9HCJ1 492 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 INTS10Q9NVR2 710 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 AKAP9Q99996 3911 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 FEZF1A0PJY2 475 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CTAGE9A4FU28 777 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KIF5CO60282 957 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 AVILO75366 819 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RDH16O75452 317 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PAMP19021 973 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TPSB2P20231 275 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SKIV2L2P42285 1042 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KCNJ1P48048 391 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TERF1P54274 439 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CDK16Q00536 496 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 HSF1Q00613 529 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ABRAXAS2Q15018 415 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NSDHLQ15738 373 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MAPKAPK3Q16644 382 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KCTD19Q17RG1 926 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SLC25A25Q6KCM7 469 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 C3P1Q6ZMU1 363 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 UBE2R2Q712K3 238 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PCGF5Q86SE9 256 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 DOLPP1Q86YN1 238 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SLC5A8Q8N695 610 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KCT2Q8NC54 265 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CAMKVQ8NCB2 501 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PLPP5Q8NEB5 264 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TM4SF19Q96DZ7 209 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 THAP11Q96EK4 314 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 C14orf79Q96F83 325 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 LPAR4Q99677 370 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CDCP1Q9H5V8 836 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 LRFN1Q9P244 771 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CELSR1Q9NYQ6 3014 aa13.41□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NDC80O14777 642 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CDC123O75794 336 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KRT38O76015 456 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NEURL1O76050 574 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ENO3P13929 434 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TAS2R50P59544 299 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CSNK1G2P78368 415 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RHAGQ02094 409 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TLE4Q04727 773 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CTBP1Q13363 440 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 USP10Q14694 798 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RPS6KA1Q15418 735 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ZNF549Q6P9A3 640 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CDH24Q86UP0 819 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PEX11GQ96HA9 241 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RBCK1Q9BYM8 510 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ENKD1Q9H0I2 346 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KLHL42Q9P2K6 505 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GUCA1BQ9UMX6 200 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MED16Q9Y2X0 877 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TACC2O95359 2948 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CCDC168Q8NDH2 2452 aa13.4□□□□□ -0.26
HLA-DQB2-229ENST00000411527 HIVEP1P15822 2718 aa13.4□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF860A6NHJ4 632 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 E9PLN8 166 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PRRG2O14669 202 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LCMT2O60294 686 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 COILP38432 576 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 OR4D2P58180 307 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SLC26A5P58743 744 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TBPL1P62380 186 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 THOC5Q13769 683 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DHX34Q14147 1143 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TESK1Q15569 626 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms