RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CELA2AP08217 269 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 ANXA5P08758 320 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 CCDC166P0CW27 439 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 ITGA3P26006 1051 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 SLC6A12P48065 614 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 KCNC1P48547 511 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 CCR8P51685 355 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 EMP2P54851 167 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 REEP5Q00765 189 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 EEF1A2Q05639 463 aaKnown RBP18.05■□□□□ 0.48
SF3A1-202ENST00000411423 DLG1Q12959 904 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 NDUFA9Q16795 377 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 PLEKHN1Q494U1 663 aaPredicted RBP18.05■□□□□ 0.48
SF3A1-202ENST00000411423 CMC1Q7Z7K0 106 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 CTAGE3PQ8IX95 158 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 KLHDC8AQ8IYD2 350 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 CAMKVQ8NCB2 501 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 MKKSQ9NPJ1 570 aaPredicted RBP18.05■□□□□ 0.48
SF3A1-202ENST00000411423 DOCK10Q96BY6 2186 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 SCN3AQ9NY46 2000 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 PABPN1LA6NDY0 278 aaKnown RBP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 ZNF860A6NHJ4 632 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 NCF1BA6NI72 391 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 NCF1CA8MVU1 366 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 C4orf51C9J302 202 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 H0YIG0 161 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 PRPF4O43172 522 aaKnown RBP eCLIP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 DPM1O60762 260 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 PRAMEF4O60810 478 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 RDH16O75452 317 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 NCF1P14598 390 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 VARSP26640 1264 aaKnown RBP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 SCTRP47872 440 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 SRSF1Q07955 248 aaKnown RBP eCLIP18.04■□□□□ 0.48
SF3A1-202ENST00000411423 HYAL2Q12891 473 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 TGFBIQ15582 683 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 WHAMMP3Q1A5X7 153 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 PRAMEF9Q5VWM5 478 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 NXPE4Q6UWF7 544 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 TMPRSS11BQ86T26 416 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 AFAP1L2Q8N4X5 818 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 OR5T3Q8NGG3 340 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 ESAMQ96AP7 390 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 UBXN10Q96LJ8 280 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 EGFL8Q99944 293 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 C14orf105Q9NVL8 296 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 C5AR2Q9P296 337 aa18.04■□□□□ 0.48
SF3A1-202ENST00000411423 COL12A1Q99715 3063 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 IGHV1-45A0A0A0MS14 117 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 A0A1W2PQ72 361 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 HMX2A2RU54 273 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 TTLL8A6PVC2 850 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 MAP2K7O14733 419 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 NDUFS4O43181 175 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 HPP00738 406 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 HEXBP07686 556 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 ACPPP15309 386 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 STMN1P16949 149 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 AVPR1BP47901 424 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 UQCRFS1P47985 274 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 SLC12A2P55011 1212 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 CSHL1Q14406 222 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 PCOLCEQ15113 449 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 GRTP1Q5TC63 336 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 TMEM205Q6UW68 189 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 IGFL3Q6UXB1 125 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 LANCL3Q6ZV70 420 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 ADAMTSL2Q86TH1 951 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 MMGT1Q8N4V1 131 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 OR51Q1Q8NH59 317 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 THOC3Q96J01 351 aaKnown RBP18.03■□□□□ 0.48
SF3A1-202ENST00000411423 VN1R1Q9GZP7 353 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 PELI2Q9HAT8 420 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 MKL2Q9ULH7 1088 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 NAALAD2Q9Y3Q0 740 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 ASB1Q9Y576 335 aa18.03■□□□□ 0.48
SF3A1-202ENST00000411423 LOC102723996A0A087X1L8 192 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 KLHL18O94889 574 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 WDR47O94967 919 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 SLC35E2BP0CK96 405 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 ECHS1P30084 290 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 GRK3P35626 688 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 RAB10P61026 200 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 IGFL2Q6UWQ7 119 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 FRA10AC1Q70Z53 315 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 NT5CQ8TCD5 201 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 CPT1CQ8TCG5 803 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 PSMF1Q92530 271 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 PNPLA2Q96AD5 504 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 C19orf60Q96EN9 201 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 TSPAN17Q96FV3 270 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 RBCK1Q9BYM8 510 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 LHPPQ9H008 270 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 KLHL31Q9H511 634 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 NINJ2Q9NZG7 142 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 TXNDC16Q9P2K2 825 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 ZFP69BQ9UJL9 534 aa18.02■□□□□ 0.48
SF3A1-202ENST00000411423 G3BP2Q9UN86 482 aaKnown RBP18.02■□□□□ 0.48
SF3A1-202ENST00000411423 DYRK1BQ9Y463 629 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms