RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SLC22A2O15244 555 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ADAM12O43184 909 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 BUD23O43709 281 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 ACSL4O60488 711 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 LDB3O75112 727 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 C1QL1O75973 258 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 KIAA0754O94854 1291 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 BMP10O95393 424 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 NUDT3O95989 172 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 UGT2B4P06133 528 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 LIPFP07098 398 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 PROS1P07225 676 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 HSPA8P11142 646 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 CHRNB1P11230 501 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 PAICSP22234 425 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 GALP22466 123 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 HTR2AP28223 471 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 FCGR2BP31994 310 aaPredicted RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 PLA2G5P39877 138 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 SLC1A3P43003 542 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 MAGEA11P43364 429 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 TNFRSF4P43489 277 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 CCL11P51671 97 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 NR0B1P51843 470 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 ACTR3P61158 418 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 RPS13P62277 151 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 MYBPC1Q00872 1141 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 EEF1A2Q05639 463 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 CTTNQ14247 550 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 STX1AQ16623 288 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ANKRD55Q3KP44 614 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ADPRMQ3LIE5 342 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 AMZ1Q400G9 498 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 NKAIN2Q5VXU1 208 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 SUMO4Q6EEV6 95 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 UGT3A1Q6NUS8 523 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 FUT10Q6P4F1 479 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 METAP1DQ6UB28 335 aaPredicted RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 SLC16A12Q6ZSM3 486 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 LUZP1Q86V48 1076 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 SLC22A9Q8IVM8 553 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 MAP7D3Q8IWC1 876 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 CHERPQ8IWX8 916 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 CPSF7Q8N684 471 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 LRRC17Q8N6Y2 441 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 GBP7Q8N8V2 638 aaPredicted RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 NPEPL1Q8NDH3 523 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 RNF128Q8TEB7 428 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 AZIN2Q96A70 460 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ZNF48Q96MX3 618 aaPredicted RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 MTERF1Q99551 399 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 TBC1D10AQ9BXI6 508 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 MRPL13Q9BYD1 178 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 VN1R1Q9GZP7 353 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 R3HDMLQ9H3Y0 253 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 RIOX1Q9H6W3 641 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 YY1AP1Q9H869 796 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ACKR4Q9NPB9 350 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 KLHL8Q9P2G9 620 aaPredicted RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 ZNHIT2Q9UHR6 403 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 TNNQ9UQP3 1299 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 MRPS2Q9Y399 296 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 INSL6Q9Y581 213 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.58□□□□□ -1.68
LSM5-205ENST00000409952 PTCH1Q13635 1447 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 SF3B1O75533 1304 aaKnown RBP eCLIP4.57□□□□□ -1.683e-7■■■■■ 27.3
LSM5-205ENST00000409952 WDR19Q8NEZ3 1342 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 TRAV18A0A075B6X5 111 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 ARPC4-TTLL3A0A0A6YYG9 625 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 C17orf105B2RV13 164 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 TMEM178BH3BS89 294 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 M0R296 226 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 EEF2KO00418 725 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 PRRG1O14668 218 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 ITM2AO43736 263 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 RNASEH1O60930 286 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 CIB2O75838 187 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 PIGNO95427 931 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 IFNA2P01563 188 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 H1F0P07305 194 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 SERPINF2P08697 491 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 ZCCHC18P0CG32 403 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 KRT3P12035 628 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 GNSP15586 552 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 DGKAP23743 735 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 STIP1P31948 543 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 CCR1P32246 355 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 RFC4P35249 363 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 RPL3P39023 403 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 MNDAP41218 407 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 ATP5IP56385 69 aaPredicted RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 RPP38P78345 283 aaKnown RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 NHLH1Q02575 133 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 FUT7Q11130 342 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 MYBPHQ13203 477 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 MSLNQ13421 630 aaPredicted RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 PDK3Q15120 406 aa4.57□□□□□ -1.68
LSM5-205ENST00000409952 ZC2HC1CQ53FD0 456 aaPredicted RBP4.57□□□□□ -1.68
LSM5-205ENST00000409952 PACS1Q6VY07 963 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms