RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 RASA2Q15283 850 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 RBBP5Q15291 538 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 HIST2H2ACQ16777 129 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 PFKFB4Q16877 469 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 FBXO48Q5FWF7 155 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 XKR6Q5GH73 641 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 HIST2H2AA3Q6FI13 130 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 TMEM214Q6NUQ4 689 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SLCO4C1Q6ZQN7 724 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 OVCH1Q7RTY7 1134 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 METTL27Q8N6F8 245 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 LSM14AQ8ND56 463 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 TRPV3Q8NET8 790 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 OR2Y1Q8NGV0 311 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 CAVIN3Q969G5 261 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 UBE2E3Q969T4 207 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 ESAMQ96AP7 390 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 TM4SF19Q96DZ7 209 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 PTCD3Q96EY7 689 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 WBP1Q96G27 269 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 GPR78Q96P69 363 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 IP6K3Q96PC2 410 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 RUFY1Q96T51 708 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 EFCAB11Q9BUY7 163 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SLC26A1Q9H2B4 701 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MRPL46Q9H2W6 279 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 WDR54Q9H977 334 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 ANKHQ9HCJ1 492 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 PRM3Q9NNZ6 103 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF282Q9UDV7 671 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MAN2B2Q9Y2E5 1009 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 PTRH2Q9Y3E5 179 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MAU2Q9Y6X3 613 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SMIM23A6NLE4 172 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 H0YIG0 161 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 STX16-NPEPL1H3BU86 382 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 STX16O14662 325 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 LCMT2O60294 686 aaKnown RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 RFPL1O75677 317 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 IGHEP01854 428 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SHBGP04278 402 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 GSTA1P08263 222 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 NUDT17P0C025 328 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 TAC1P20366 129 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 AGTR2P50052 363 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 STXBP1P61764 594 aaKnown RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 IRF8Q02556 426 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 IFFO1Q0D2I5 559 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 CHIT1Q13231 466 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 DSG2Q14126 1118 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SSPNQ14714 243 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 PCBP2Q15366 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 TBCCQ15814 346 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 DEFB109BQ30KR1 87 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 TMIGD1Q6UXZ0 262 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 COX15Q7KZN9 410 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 ABHD13Q7L211 337 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 NBEAQ8NFP9 2946 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 ZCCHC10Q8TBK6 192 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 APOBEC4Q8WW27 367 aaKnown RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 TTC9Q92623 222 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 EXTL1Q92935 676 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 MIEF2Q96C03 454 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 WDR34Q96EX3 536 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 MMABQ96EY8 250 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 VPS50Q96JG6 964 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 YIPF2Q9BWQ6 316 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SPNS1Q9H2V7 528 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 NT5DC2Q9H857 520 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SYNPO2LQ9H987 977 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 MKKSQ9NPJ1 570 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 C14orf105Q9NVL8 296 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF358Q9NW07 568 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 GEMIN8Q9NWZ8 242 aaKnown RBP10.37□□□□□ -0.75
CHMP3-205ENST00000409810 COPG2Q9UBF2 871 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 DCDC2Q9UHG0 476 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 MED13Q9UHV7 2174 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 MAP4K5Q9Y4K4 846 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SLC22A7Q9Y694 548 aa10.37□□□□□ -0.75
CHMP3-205ENST00000409810 SCN2AQ99250 2005 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ATMQ13315 3056 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ZFYVE26Q68DK2 2539 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 A0A0A6YYC8 382 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ANKDD1BA6NHY2 528 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 I3L1I5 382 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 TK2O00142 265 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 ATXN7O15265 892 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 UGDHO60701 494 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 GLRA3O75311 464 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 KLF7O75840 302 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-205ENST00000409810 MED26O95402 600 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 STATHP02808 62 aa10.36□□□□□ -0.75
CHMP3-205ENST00000409810 SERPINA6P08185 405 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms