RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 BNIP3Q12983 259 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 NFATC4Q14934 902 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 GTDC1Q4AE62 458 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 ZNF683Q8IZ20 524 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 CMTM7Q96FZ5 175 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 DENND2DQ9H6A0 471 aaPredicted RBP10.98□□□□□ -0.65
SNX13-202ENST00000409604 EBF2Q9HAK2 575 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 H2AFY2Q9P0M6 372 aaPredicted RBP10.98□□□□□ -0.65
SNX13-202ENST00000409604 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
SNX13-202ENST00000409604 SDK2Q58EX2 2172 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 PDPK1O15530 556 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 HSMCR30P0CW71 290 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 BCKDHAP12694 445 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CCND1P24385 295 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 PTX3P26022 381 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 RRM2P31350 389 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 COPZ1P61923 177 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 EPS8Q12929 822 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 FAM83HQ6ZRV2 1179 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 CLECL1Q8IZS7 167 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CSNK1A1LQ8N752 337 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 SLC12A9Q9BXP2 914 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CROCCQ5TZA2 2017 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 TGDSO95455 350 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CST1P01037 141 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CISD3P0C7P0 127 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 XRCC1P18887 633 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 MAGEA3P43357 314 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 AVPR1BP47901 424 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CCR3P51677 355 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 MRPS35P82673 323 aaKnown RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 BNIP1Q12981 228 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 LAPTM5Q13571 262 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 GANABQ14697 944 aaKnown RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 ADNP2Q6IQ32 1131 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 EPGNQ6UW88 154 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 CAMKVQ8NCB2 501 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 SH3YL1Q96HL8 342 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 GORASP1Q9BQQ3 440 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 PDE7BQ9NP56 450 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 MBD1Q9UIS9 605 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 DHRS12A0PJE2 317 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 TMEM150CB9EJG8 249 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 JUPP14923 745 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 ENGP17813 658 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 IGFALSP35858 605 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 ETV4P43268 484 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 ASMTP46597 345 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 OR1D4P47884 311 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 MASP1P48740 699 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 SHC2P98077 582 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 DGLUCYQ7Z3D6 616 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 FBXO27Q8NI29 283 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 FRS2Q8WU20 508 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 DPH2Q9BQC3 489 aaPredicted RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
SNX13-202ENST00000409604 SUSD2Q9UGT4 822 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 SERTAD3Q9UJW9 196 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 TESMINQ9Y4I5 508 aa10.97□□□□□ -0.65
SNX13-202ENST00000409604 LOC285556D6RIA3 1793 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 CLIC1O00299 241 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 TRIM38O00635 465 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 NPC1O15118 1278 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 OR10H3O60404 316 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 PSMG1O95456 288 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 IFNA14P01570 189 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 SUZ12Q15022 739 aaKnown RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 AFMIDQ63HM1 303 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ICE2Q659A1 982 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 TMEM214Q6NUQ4 689 aaKnown RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 RHEBL1Q8TAI7 183 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ACTRT2Q8TDY3 377 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 REXO5Q96IC2 774 aaKnown RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 COL21A1Q96P44 957 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 SLC35A5Q9BS91 424 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 TMEM79Q9BSE2 394 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 RAB11FIP5Q9BXF6 653 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ZBTB26Q9HCK0 441 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 TLR4O00206 839 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 DFNA5O60443 496 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 DEAF1O75398 565 aaPredicted RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 SORBS2O94875 1100 aaKnown RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 IGHA2P01877 340 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 OCM2P0CE71 109 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 OCMP0CE72 109 aaPredicted RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 TFPIP10646 304 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 CSNK1DP48730 415 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 CLCN7P51798 805 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 PTPN5P54829 565 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 SPIBQ01892 262 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 GPR18Q14330 331 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 TTC33Q6PID6 262 aaPredicted RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 NXPE4Q6UWF7 544 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ZBTB46Q86UZ6 589 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ZDHHC13Q8IUH4 622 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 SFTPA2Q8IWL1 248 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 KLHDC8AQ8IYD2 350 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms