RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 TRPV4Q9HBA0 871 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 MRM3Q9HC36 420 aaKnown RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 EIF3KQ9UBQ5 218 aaKnown RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SEC14L3Q9UDX4 400 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ANKRD36CQ5JPF3 1778 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 FIGNL2A6NMB9 653 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 H7BY64 318 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 VILLO15195 856 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PCDH7O60245 1069 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 UNC5CO95185 931 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 IL7RP16871 459 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 FDXRP22570 491 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SLC5A2P31639 672 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 HSPB3Q12988 150 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SEMA5AQ13591 1074 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 FLOT2Q14254 428 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PTPRCAPQ14761 206 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SLC5A9Q2M3M2 681 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 KCTD11Q693B1 232 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ADAMTSL4Q6UY14 1074 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 LDB1Q86U70 411 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 TRIM73Q86UV7 250 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ARFGAP1Q8N6T3 406 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 NEK7Q8TDX7 302 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 CKAP2Q8WWK9 683 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ZUFSPQ96AP4 578 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PTCD3Q96EY7 689 aaKnown RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 IMP4Q96G21 291 aaKnown RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PRAP1Q96NZ9 151 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ZNF184Q99676 751 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 BTBD10Q9BSF8 475 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 LRFN3Q9BTN0 628 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 UGT2B28Q9BY64 529 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 KLHL4Q9C0H6 718 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SP140LQ9H930 580 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 MKKSQ9NPJ1 570 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 LEF1Q9UJU2 399 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SNX11Q9Y5W9 270 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 RNF215Q9Y6U7 377 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 H0Y8X5 98 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 TRIM3O75382 744 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SHBGP04278 402 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ETS1P14921 441 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 GABRG2P18507 467 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 AK4P27144 223 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 STC1P52823 247 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 TRAF2Q12933 501 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 FASTKQ14296 549 aaKnown RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 PLK5Q496M5 336 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 RNF220Q5VTB9 566 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SPATA19Q7Z5L4 167 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 KIAA0907Q7Z7F0 614 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SLC30A8Q8IWU4 369 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 NSMCE2Q96MF7 247 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 VPS35Q96QK1 796 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 SLC6A16Q9GZN6 736 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 MMADHCQ9H3L0 296 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ATXN10Q9UBB4 475 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 NDRG3Q9UGV2 375 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 MBD1Q9UIS9 605 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-203ENST00000409598 ZNF229Q9UJW7 825 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 CA5BQ9Y2D0 317 aa7.23□□□□□ -1.25
SH3D19-203ENST00000409598 TCHHQ07283 1943 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 LY75O60449 1722 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PROM1O43490 865 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 HMGA1P17096 107 aaKnown RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 GDF1P27539 372 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 NAGLUP54802 743 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 LCP2Q13094 533 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 RIN1Q13671 783 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 SLC14A2Q15849 920 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 FAM98BQ52LJ0 330 aaKnown RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 LIPMQ5VYY2 423 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 AAGABQ6PD74 315 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 ADGRG6Q86SQ4 1221 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 SLC22A16Q86VW1 577 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 THAP3Q8WTV1 239 aaPredicted RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 APOBEC4Q8WW27 367 aaKnown RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 EME1Q96AY2 570 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 SLC38A2Q96QD8 506 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 UTS2RQ9UKP6 389 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 FARSAQ9Y285 508 aaKnown RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 EMC9Q9Y3B6 208 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 H3BN98 237 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 FOXE1O00358 373 aaPredicted RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PENKP01210 267 aaPredicted RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 IDO1P14902 403 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 ZNF823P16415 610 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 ERV3-1Q14264 604 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 HSDL2Q6YN16 418 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PEG10Q86TG7 708 aaKnown RBP7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PDZD3Q86UT5 571 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 TICAM1Q8IUC6 712 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 PHOSPHO1Q8TCT1 267 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 AMDHD1Q96NU7 426 aa7.22□□□□□ -1.25
SH3D19-203ENST00000409598 ADNPQ9H2P0 1102 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms