RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 GKN2Q86XP6 184 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 MAML2Q8IZL2 1156 aaPredicted RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 MINDY1Q8N5J2 469 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 DPP10Q8N608 796 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TESCQ96BS2 214 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TRIM8Q9BZR9 551 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SYNPO2LQ9H987 977 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 TMEM181Q9P2C4 612 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 SPASTQ9UBP0 616 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 POMPQ9Y244 141 aa13.47□□□□□ -0.25
GPNMB-203ENST00000409458 GSAPA4D1B5 854 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 FAM221BA6H8Z2 402 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 PLPP1O14494 284 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 YY2O15391 372 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 MAP3K7O43318 606 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 LAMTOR5O43504 91 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 SDC3O75056 442 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 KLHL18O94889 574 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 PCSK2P16519 638 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 GRIA3P42263 894 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 ERFP50548 548 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 PHC1P78364 1004 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 FOXM1Q08050 763 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 UGT8Q16880 541 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 C6orf163Q5TEZ5 329 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.26
GPNMB-203ENST00000409458 LYSMD4Q5XG99 296 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 PRMT9Q6P2P2 845 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 PAQR7Q86WK9 346 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 FAM156AQ8NDB6 213 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 CREB3L4Q8TEY5 395 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 SLC22A18Q96BI1 424 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 F2RL3Q96RI0 385 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 HOPXQ9BPY8 73 aaPredicted RBP13.46□□□□□ -0.26
GPNMB-203ENST00000409458 ZNF717Q9BY31 904 aaPredicted RBP13.46□□□□□ -0.26
GPNMB-203ENST00000409458 ABCD2Q9UBJ2 740 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 NEUROG3Q9Y4Z2 214 aa13.46□□□□□ -0.26
GPNMB-203ENST00000409458 MUC3AQ02505 3323 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 A0A1B0GVT2 93 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 GNG14A0A1W2PPG7 69 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PRORSD1PA6NEY8 169 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 TRIM38O00635 465 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 NME4O00746 187 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 AQP9O43315 295 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PRMT3O60678 531 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 SEMA3DO95025 777 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 B3GALT4O96024 378 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 STATHP02808 62 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PRPS1L1P21108 318 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 SLC6A2P23975 617 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 HRH2P25021 359 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 MSX2P35548 267 aaPredicted RBP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 GRK3P35626 688 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 DHPSP49366 369 aaPredicted RBP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 C21orf58P58505 322 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 ACTR3P61158 418 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 HNRNPKP61978 463 aaKnown RBP eCLIP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PLIN5Q00G26 463 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 CYP4F3Q08477 520 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 ZNF763Q0D2J5 394 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PGS1Q32NB8 556 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 DEPDC1Q5TB30 811 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 DLEU7Q6UYE1 221 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 TTLQ8NG68 377 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 GTF2H4Q92759 462 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 SARGQ9BW04 601 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 RASSF4Q9H2L5 321 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 UCKL1Q9NWZ5 548 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 CMTM6Q9NX76 183 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 GMPR2Q9P2T1 348 aaKnown RBP13.45□□□□□ -0.26
GPNMB-203ENST00000409458 MCM8Q9UJA3 840 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 DOLKQ9UPQ8 538 aa13.45□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM221A6NGB7 291 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 M0R296 226 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 RTCAO00442 366 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SCAMP2O15127 329 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 NDUFS4O43181 175 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 CLEC3AO75596 197 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PIAS2O75928 621 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SERPIND1P05546 499 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 KLK1P06870 262 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 TCN1P20061 433 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 MAGP20916 626 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ME2P23368 584 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 HNRNPH1P31943 449 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 S100A3P33764 101 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ASMTP46597 345 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PWP1Q13610 501 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 CCNIQ14094 377 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms