RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RAP2CQ9Y3L5 183 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 TRAF6Q9Y4K3 522 aa31.8■■■□□ 2.68
CSNK1E-204ENST00000403904 OCRLQ01968 901 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 SGO1Q5FBB7 561 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 WASHC2DQ5SRD0 308 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 FOXR1Q6PIV2 292 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 HUS1BQ8NHY5 278 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 SLC13A3Q8WWT9 602 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 MTERF1Q99551 399 aaKnown RBP31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 SPRTNQ9H040 489 aaPredicted RBP31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 ELOVL6Q9H5J4 265 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 APMAPQ9HDC9 416 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 IRAK4Q9NWZ3 460 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 SNX6Q9UNH7 406 aa31.79■■■□□ 2.68
CSNK1E-204ENST00000403904 FGF4P08620 206 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 UROSP10746 265 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 MC2RQ01718 297 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 IFT88Q13099 833 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 EIF3IQ13347 325 aaKnown RBP31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 COL9A2Q14055 689 aaPredicted RBP31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 C3orf38Q5JPI3 329 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 ASPGQ86U10 573 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 TTLQ8NG68 377 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 CTRCQ99895 268 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 SLCO1B3Q9NPD5 702 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 SATB2Q9UPW6 733 aa31.78■■■□□ 2.68
CSNK1E-204ENST00000403904 MANBAO00462 879 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 PLD2O14939 933 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 P2RX6O15547 441 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 NDUFS4O43181 175 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 SNUPNO95149 360 aaKnown RBP31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 HKDC1Q2TB90 917 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 CLYBLQ8N0X4 340 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 CSNK1A1LQ8N752 337 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 TRPV3Q8NET8 790 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 WDR36Q8NI36 951 aaKnown RBP31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 CREB3L4Q8TEY5 395 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 ZNF473Q8WTR7 871 aaKnown RBP31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 CCT6BQ92526 530 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 TM4SF19Q96DZ7 209 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 ZNF285Q96NJ3 590 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 SERTAD3Q9UJW9 196 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 B4E171 279 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 POLR3GO15318 223 aaPredicted RBP31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 OR2B3O76000 313 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 KRT6AP02538 564 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 KRT6BP04259 564 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 JMJD7P0C870 316 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 ETV5P41161 510 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 TSPAN7P41732 249 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 KRT6CP48668 564 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 HTR6P50406 440 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 KANK2Q63ZY3 851 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 RGS9BPQ6ZS82 235 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 SELENOMQ8WWX9 145 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 HBEGFQ99075 208 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 FBXO8Q9NRD0 319 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 PNPOQ9NVS9 261 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 SLC39A1Q9NY26 324 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 PISDQ9UG56 409 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 RARRES3Q9UL19 164 aa31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 EPB41L3Q9Y2J2 1087 aaPredicted RBP31.77■■■□□ 2.68
CSNK1E-204ENST00000403904 H3BMH7 237 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 POLR1CO15160 346 aaPredicted RBP31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 PDYNP01213 254 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 MAPK10P53779 464 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 ITGA1P56199 1179 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 FOXC1Q12948 553 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 DGLUCYQ7Z3D6 616 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 HAO1Q9UJM8 370 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 TSC22D4Q9Y3Q8 395 aa31.76■■■□□ 2.67
CSNK1E-204ENST00000403904 ULK1O75385 1050 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 SLC35G6P0C7Q6 338 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 GSTM2P28161 218 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 RPL14P50914 215 aaKnown RBP31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 IL11RAQ14626 422 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 TCTE1Q5JU00 501 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 SCIMPQ6UWF3 145 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 GPR135Q8IZ08 494 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 CAMKVQ8NCB2 501 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 SEC16BQ96JE7 1060 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 DNAJC15Q9Y5T4 150 aa31.75■■■□□ 2.67
CSNK1E-204ENST00000403904 MAGEB17A8MXT2 336 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 TCP11X1B4DZS4 312 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 SH3BGRLO75368 114 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 CLEC3AO75596 197 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 TBX6O95947 436 aaPredicted RBP31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 PIK3CBP42338 1070 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 ABRAXAS2Q15018 415 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 UGT3A2Q3SY77 523 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 PRAMEF17Q5VTA0 474 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 FAM47EQ6ZV65 393 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 PPP1R3BQ86XI6 285 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 PMEPA1Q969W9 287 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 DMRT3Q9NQL9 472 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 ADGRE2Q9UHX3 823 aa31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 RUVBL1Q9Y265 456 aaKnown RBP31.74■■■□□ 2.67
CSNK1E-204ENST00000403904 TGFB1P01137 390 aa31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 RPS13P62277 151 aaKnown RBP31.73■■■□□ 2.67
CSNK1E-204ENST00000403904 PWP1Q13610 501 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms