RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 ZNF541Q9H0D2 1346 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 NPHS1O60500 1241 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 WDPCPO95876 746 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 HCAR3P49019 387 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
RERE-204ENST00000400908 MOGSQ13724 837 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 C12orf40Q86WS4 652 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 PRSS58Q8IYP2 241 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 FAM71AQ8IYT1 594 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 BEST3Q8N1M1 668 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 FAM86B1Q8N7N1 296 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 SOCS4Q8WXH5 440 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 SLC25A44Q96H78 314 aaPredicted RBP13.47□□□□□ -0.25
RERE-204ENST00000400908 ACTR6Q9GZN1 396 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 A0A1W2PRB8 838 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 RBBP9O75884 186 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 MT-ND2P03891 347 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 NFKB2Q00653 900 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 FCRL2Q96LA5 508 aaPredicted RBP13.47□□□□□ -0.25
RERE-204ENST00000400908 ASPNQ9BXN1 380 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.253e-9■■■■■ 31.2
RERE-204ENST00000400908 ADAP2Q9NPF8 381 aa13.47□□□□□ -0.25
RERE-204ENST00000400908 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 SLIT2O94813 1529 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 F8W036 122 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 CLDN11O75508 207 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 C8GP07360 202 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 RNF4P78317 190 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 BLOC1S1P78537 153 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ODF4Q2M2E3 257 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ZNF619Q8N2I2 560 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 MARVELD2Q8N4S9 558 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 C12orf45Q8N5I9 185 aaPredicted RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 RETREG1Q9H6L5 497 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ZNF701Q9NV72 531 aaPredicted RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 AGPSO00116 658 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 MT-CO2P00403 227 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 MT-ND5P03915 603 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 PRKAR1BP31321 381 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 PLGLB1Q02325 96 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 FGL2Q14314 439 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 PARP15Q460N3 678 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 MFSD5Q6N075 450 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 COMMD7Q86VX2 200 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 KCT2Q8NC54 265 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ELP5Q8TE02 316 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 RNF19AQ9NV58 838 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 RAI2Q9Y5P3 530 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 NEDD8-MDP1E9PL57 170 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 GRID2O43424 1007 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 FAM155BO75949 473 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 LYPLA2O95372 231 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ADH1AP07327 375 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 MARCKSL1P49006 195 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 EEFSECP57772 596 aaKnown RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 C1QTNF8P60827 252 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ZNF781Q8N8C0 355 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 ORAI3Q9BRQ5 295 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
RERE-204ENST00000400908 NUFIP1Q9UHK0 495 aaKnown RBP13.46□□□□□ -0.25
RERE-204ENST00000400908 APODP05090 189 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.26
RERE-204ENST00000400908 CDH15P55291 814 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 SELENOVP59797 346 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 DSTNP60981 165 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 DYRK1AQ13627 763 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 TEX44Q53QW1 395 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 CARD16Q5EG05 197 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 SLC39A4Q6P5W5 647 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 CCDC71Q8IV32 467 aaPredicted RBP13.46□□□□□ -0.26
RERE-204ENST00000400908 MOAP1Q96BY2 351 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 COPZ2Q9P299 210 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 LRRC42Q9Y546 428 aa13.46□□□□□ -0.26
RERE-204ENST00000400908 SETD1AO15047 1707 aaKnown RBP13.46□□□□□ -0.26
RERE-204ENST00000400908 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 A0A1B0GV50 99 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 A6NJ64 397 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 H3BSA7 217 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 SHOXO15266 292 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 NDST3O95803 873 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 PLA2G16P53816 162 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 RPL26P61254 145 aaKnown RBP13.45□□□□□ -0.26
RERE-204ENST00000400908 NCS1P62166 190 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 IRF5Q13568 498 aa13.45□□□□□ -0.26
RERE-204ENST00000400908 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
RERE-204ENST00000400908 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
RERE-204ENST00000400908 INPP4AQ96PE3 977 aaPredicted RBP13.45□□□□□ -0.26
RERE-204ENST00000400908 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms