RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NPTX1Q15818 432 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 ZSWIM7Q19AV6 140 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 ALDH16A1Q8IZ83 802 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 FAM86B1Q8N7N1 296 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 GINS4Q9BRT9 223 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 CRB3Q9BUF7 120 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 HOXD1Q9GZZ0 328 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 ZBP1Q9H171 429 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 GAREM1Q9H706 876 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 PCDHGA6Q9Y5G7 932 aa7.7□□□□□ -1.18
USP47-203ENST00000399455 TEX13CA0A0J9YWL9 993 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 H0YJX3 145 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PGCP20142 388 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ECH1Q13011 328 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SERTAD2Q14140 314 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TMEM240Q5SV17 173 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CATSPEREQ5SY80 951 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SLC39A4Q6P5W5 647 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PEX13Q92968 403 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 HAVCR1Q96D42 359 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RBP7Q96R05 134 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RBM4BQ9BQ04 359 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 WDR77Q9BQA1 342 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 RBM4Q9BWF3 364 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 SEMA6AQ9H2E6 1030 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PLGRKTQ9HBL7 147 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PDP1Q9P0J1 537 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 A0A1W2PPL8 197 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CAPN8A6NHC0 703 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PTGES3LE9PB15 166 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GNB5O14775 395 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PGRMC2O15173 223 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RNF13O43567 381 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CPNE6O95741 557 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 HOXA9P31269 272 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CTSKP43235 329 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 MRPS35P82673 323 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 BST1Q10588 318 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 EFR3AQ14156 821 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ZCWPW2Q504Y3 356 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SPANXN2Q5MJ10 180 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TMEM201Q5SNT2 666 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 QSOX2Q6ZRP7 698 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SATL1Q86VE3 508 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 WDR60Q8WVS4 1066 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ROPN1LQ96C74 230 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RADILQ96JH8 1075 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CD244Q9BZW8 370 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GPRC5BQ9NZH0 403 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 MAN2B2Q9Y2E5 1009 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 OR1A2Q9Y585 309 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ATP6AP2A0A1C7CYW4 349 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 WBP4O75554 376 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 ATP6AP2O75787 350 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TNFAIP8O95379 198 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 AK1P00568 194 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TCN2P20062 427 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GSTM2P28161 218 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GKP32189 559 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 NSDHLQ15738 373 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 FLYWCH1Q4VC44 716 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 KBTBD8Q8NFY9 601 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 DHRS1Q96LJ7 313 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ZMAT2Q96NC0 199 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 GHRLQ9UBU3 117 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TOR1BO14657 336 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RCBTB2O95199 551 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 EBLN1P0CF75 366 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CD70P32970 193 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RAB8AP61006 207 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RPS13P62277 151 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 HNRNPA1L2Q32P51 320 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 SLC36A3Q495N2 470 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TNFAIP8L2Q6P589 184 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 FIGLAQ6QHK4 219 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 CRTC1Q6UUV9 634 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 Q6ZVL8 140 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 DPPA4Q7L190 304 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 KBTBD2Q8IY47 623 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GPR137CQ8N3F9 429 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ACVR1CQ8NER5 493 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 NINJ1Q92982 152 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 DNMT3BQ9UBC3 853 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 TMEM5Q9Y2B1 443 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ADAM18Q9Y3Q7 739 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 SCN7AQ01118 1682 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ZNF670-ZNF695F2Z2N8 137 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PIP5K1BO14986 540 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 AQP9O43315 295 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PDE5AO76074 875 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GSTM3P21266 225 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 OLR1P78380 273 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TXNL4AP83876 142 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 LIN52Q52LA3 116 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 REP15Q6BDI9 236 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 ABRAXAS1Q6UWZ7 409 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 GOLGA7Q7Z5G4 137 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 TRIM74Q86UV6 250 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 APCDD1Q8J025 514 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms