RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 C5AR1P21730 350 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 GJA4P35212 333 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 IL12RB1P42701 662 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 METAP1P53582 386 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CTBSQ01459 385 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 MESP2Q0VG99 397 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CNTN1Q12860 1018 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 STARD3Q14849 445 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PRAMEF14Q5SWL7 426 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PRAMEF13Q5VWM6 474 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 NAIF1Q69YI7 327 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 OR2T5Q6IEZ7 315 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 XKR5Q6UX68 686 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RAB42Q8N4Z0 105 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ARL10Q8N8L6 244 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 OR2T29Q8NH02 315 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZFP90Q8TF47 636 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 NMD3Q96D46 503 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SH3GL3Q99963 347 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RSPH9Q9H1X1 276 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RHBGQ9H310 441 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TIMMDC1Q9NPL8 285 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ADPRHL2Q9NX46 363 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ASF1AQ9Y294 204 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 LRRK1Q38SD2 2015 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 KRT87PA6NCN2 255 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ETHE1O95571 254 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CPSF4O95639 269 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SEMG1P04279 462 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 APODP05090 189 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 JUNBP17275 347 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 DNAJA1P31689 397 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RYKP34925 604 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PCGF2P35227 344 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 GABARAPL2P60520 117 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FADDQ13158 208 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TUBA3CQ13748 450 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 COMMD6Q7Z4G1 85 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SPRED2Q7Z698 418 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PTOV1Q86YD1 416 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SLC30A8Q8IWU4 369 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 C11orf65Q8NCR3 313 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TFGQ92734 400 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SH3KBP1Q96B97 665 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 MUS81Q96NY9 551 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 QRFPRQ96P65 431 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TEX101Q9BY14 249 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TOR3AQ9H497 397 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RMI1Q9H9A7 625 aa17.04■□□□□ 0.32
HLA-DQB1-204ENST00000399084 MYOCOSA0A1B0GUC4 107 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 H3BSA7 217 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TBX19O60806 448 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 GPR37L1O60883 481 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 UGT2B11O75310 529 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FABP3P05413 133 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ITGAMP11215 1152 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CDK3Q00526 305 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 DMPKQ09013 629 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 NFE2L1Q14494 772 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RGNQ15493 299 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CATSPEREQ5SY80 951 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZNF773Q6PK81 442 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SPESP1Q6UW49 350 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 VITQ6UXI7 678 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TMEM26Q6ZUK4 368 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TRIM74Q86UV6 250 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FAM129CQ86XR2 697 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RNF175Q8N4F7 328 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SETD9Q8NE22 299 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 OR5K2Q8NHB8 316 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CHST8Q9H2A9 424 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SLC24A3Q9HC58 644 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TMEM9Q9P0T7 183 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SH3BP4Q9P0V3 963 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FZD4Q9ULV1 537 aa17.03■□□□□ 0.32
HLA-DQB1-204ENST00000399084 EME2A4GXA9 379 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TRMUO75648 421 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FPR1P21462 350 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TNFRSF4P43489 277 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 HKDC1Q2TB90 917 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FAM71E1Q6IPT2 247 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 GET4Q7L5D6 327 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZNF551Q7Z340 670 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 C17orf64Q86WR6 236 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 DCP2Q8IU60 420 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZC3H7AQ8IWR0 971 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 C10orf111Q8N326 155 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FOXJ1Q92949 421 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PPCDCQ96CD2 204 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZNF764Q96H86 408 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 MAGED4Q96JG8 741 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 AIF1LQ9BQI0 150 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FBRSQ9HAH7 460 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PRM3Q9NNZ6 103 aa17.02■□□□□ 0.32
HLA-DQB1-204ENST00000399084 WASH6PQ9NQA3 447 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms