RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DCAKDQ8WVC6 231 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 KLHL6Q8WZ60 621 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 CENPNQ96H22 339 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 HRASLS2Q9NWW9 162 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 GIN1Q9NXP7 522 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SLC2A6Q9UGQ3 507 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 NPIPA1Q9UND3 350 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 M0QZQ0 153 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MYOGP15173 224 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 CSNK2A2P19784 350 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 PREPP48147 710 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 PHOSPHO1Q8TCT1 267 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 PIK3R3Q92569 461 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 CHIAQ9BZP6 476 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 POU2F3Q9UKI9 436 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 OR1I1O60431 355 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 CBLP22681 906 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 HERVK_113P63132 956 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MAFAQ8NHW3 353 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ROPN1LQ96C74 230 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 FCRL5Q96RD9 977 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 EBF4Q9BQW3 602 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ERVK-6Q9BXR3 956 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 OR8D2Q9GZM6 311 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 TFB2MQ9H5Q4 396 aaKnown RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SIX2Q9NPC8 291 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MGAT4AQ9UM21 535 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 GRID2O43424 1007 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 IL1R2P27930 398 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ECHS1P30084 290 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM240Q5SV17 173 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 METTL21CQ5VZV1 264 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ANKRD54Q6NXT1 300 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 C1orf52Q8N6N3 182 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 PRORSD1PA6NEY8 169 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 MAP3K8P41279 467 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 RNF144AP50876 292 aaPredicted RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ODF4Q2M2E3 257 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 RPS27LQ71UM5 84 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 RPLP0P6Q8NHW5 317 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 SSU72Q9NP77 194 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 EIF2B3Q9NR50 452 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 SNTG1Q9NSN8 517 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 APBB3O95704 486 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 CD2P06729 351 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 PEX2P28328 305 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ADAM8P78325 824 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 CRB2Q5IJ48 1285 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 QSOX2Q6ZRP7 698 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 THOC6Q86W42 341 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 SVOPLQ8N434 492 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 GAL3ST3Q96A11 431 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 NODALQ96S42 347 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 TNRC6CQ9HCJ0 1690 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 GPIP06744 558 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 JUNDP17535 347 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ENGP17813 658 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 CDKL1Q00532 357 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 MARCH8Q5T0T0 291 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 OR4F3Q6IEY1 312 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ADNP2Q6IQ32 1131 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 CEP97Q8IW35 865 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 MED28Q9H204 178 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 XKR8Q9H6D3 395 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 PLCL2Q9UPR0 1127 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 USP54Q70EL1 1684 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 CHP2O43745 196 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 PCSK2P16519 638 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 DSTNP60981 165 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ABCA11PQ4W5N1 156 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 OLFML1Q6UWY5 402 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 P2RY8Q86VZ1 359 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 POLR2J3Q9H1A7 115 aaKnown RBP13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 VRTNQ9H8Y1 702 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 HCFC1R1Q9NWW0 138 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 ATXN10Q9UBB4 475 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 COMMD3Q9UBI1 195 aa13.81□□□□□ -0.2
PCDHA11-201ENST00000398640 DNAJA2O60884 412 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 LEFTY1O75610 366 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 USP53Q70EK8 1073 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 NIPA2Q8N8Q9 360 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 NAT14Q8WUY8 206 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TSACCQ96A04 125 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZDHHC12Q96GR4 267 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 SH3YL1Q96HL8 342 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 CCDC115Q96NT0 180 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM109Q9BVC6 243 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF860A6NHJ4 632 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 XKP51811 444 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 RING1Q06587 406 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF805Q5CZA5 627 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 C12orf40Q86WS4 652 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF676Q8N7Q3 588 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 C1orf216Q8TAB5 229 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms