RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MESP2Q0VG99 397 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 LDLRAP1Q5SW96 308 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR2T5Q6IEZ7 315 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SHQ1Q6PI26 577 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DPPA4Q7L190 304 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PARS2Q7L3T8 475 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ZC3H7AQ8IWR0 971 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MRPL43Q8N983 215 aaKnown RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR2T29Q8NH02 315 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HPS1Q92902 700 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MAGEB10Q96LZ2 347 aaPredicted RBP17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CCM2Q9BSQ5 444 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TPT1P8Q9HAU6 139 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TBC1D14Q9P2M4 693 aa17.69■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SLC1A7O00341 560 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 BCKDKO14874 412 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GBAP04062 536 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NR4A1P22736 598 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MMP12P39900 470 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 IL5RAQ01344 420 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GRSF1Q12849 480 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TRIM16LQ309B1 348 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TCEAL5Q5H9L2 206 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KIAA0907Q7Z7F0 614 aaPredicted RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TMPRSS11BQ86T26 416 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SDR16C5Q8N3Y7 309 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TMCO5AQ8N6Q1 288 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ATL1Q8WXF7 558 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GLMNQ92990 594 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MAL2Q969L2 176 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 LRRC3BQ96PB8 259 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CCDC90BQ9GZT6 254 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RIBC2Q9H4K1 309 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FAM120CQ9NX05 1096 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TSPAN11A1L157 253 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SCAMP2O15127 329 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NOL3O60936 208 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EFCAB14O75071 495 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GSTM2P28161 218 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 AQP1P29972 269 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HNF4AP41235 474 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DAPP51397 102 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PLA2G16P53816 162 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CASP9P55211 416 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CATSPEREQ5SY80 951 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PDE12Q6L8Q7 609 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GRASPQ7Z6J2 395 aaPredicted RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TPD52L3Q96J77 140 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 HSH2DQ96JZ2 352 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CORINQ9Y5Q5 1042 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GNG14A0A1W2PPG7 69 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ANKRD34BA5PLL1 514 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 K7ESM1 405 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PRMT3O60678 531 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MYO1DO94832 1006 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ABCB1P08183 1280 aaPredicted RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 INHBBP09529 407 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EPCAMP16422 314 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 DDX6P26196 483 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 NFATC3Q12968 1075 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 C12orf40Q86WS4 652 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PIK3C3Q8NEB9 887 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TANKQ92844 425 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CSF3RQ99062 836 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SH3BP4Q9P0V3 963 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 WARS2Q9UGM6 360 aaKnown RBP17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SH2B3Q9UQQ2 575 aa17.68■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MTCL1Q9Y4B5 1905 aaKnown RBP17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PCM1Q15154 2024 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SLC16A6O15403 523 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FABP3P05413 133 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CCNA2P20248 432 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CPTPQ5TA50 214 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GTF2IRD2BQ6EKJ0 949 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GPR155Q7Z3F1 870 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GTF2IRD2Q86UP8 949 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SYTL1Q8IYJ3 562 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CFAP206Q8IYR0 622 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 TERB1Q8NA31 727 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ST13P5Q8NFI4 369 aaPredicted RBP17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 VN1R2Q8NFZ6 395 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 OR56A3Q8NH54 315 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 EFHD2Q96C19 240 aaPredicted RBP17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 VPS35Q96QK1 796 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 KLHL25Q9H0H3 589 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CXXC1Q9P0U4 656 aaPredicted RBP17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 POU2F3Q9UKI9 436 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FZD4Q9ULV1 537 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PCDHB11Q9Y5F2 797 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 A8MU76 341 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 H3BM21 787 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 QSOX1O00391 747 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 PLK4O00444 970 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 MAN1A2O60476 641 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 FSHRP23945 695 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 CDK5R2Q13319 367 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 GAB1Q13480 694 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 SPRED2Q7Z698 418 aa17.67■□□□□ 0.42
CHRFAM7A-202ENST00000397827 ZNF557Q8N988 423 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms