RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 PDYNP01213 254 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 CTSBP07858 339 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 NEK2P51955 445 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 VSX2P58304 361 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 CYP4F2P78329 520 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 ZNF33BQ06732 778 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 TUBB3Q13509 450 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 FAM47EQ6ZV65 393 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 TRPV3Q8NET8 790 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 NT5CQ8TCD5 201 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 SELENOMQ8WWX9 145 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 RERGQ96A58 199 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 ZNF501Q96CX3 271 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 FAR2Q96K12 515 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 CMKLR1Q99788 373 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 FANCEQ9HB96 536 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 DMRT3Q9NQL9 472 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 FARSBQ9NSD9 589 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 AKAP7Q9P0M2 348 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 PPT2Q9UMR5 302 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 LOXL2Q9Y4K0 774 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 DNAJC15Q9Y5T4 150 aa18.59■□□□□ 0.57
MAP1LC3A-203ENST00000397709 CCDC187A0A096LP49 1063 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SERTM1A2A2V5 107 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 B4E171 279 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TMEM150CB9EJG8 249 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FOXE1O00358 373 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HYAL3O43820 417 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 EDF1O60869 148 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ULK1O75385 1050 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TSPAN7P41732 249 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PHEXP78562 749 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 EIF3IQ13347 325 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PWP1Q13610 501 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 DDX39BQ13838 428 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ABRAXAS2Q15018 415 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SGO1Q5FBB7 561 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TCTE1Q5JU00 501 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TMPRSS7Q7RTY8 843 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RNF175Q8N4F7 328 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 AFAP1L2Q8N4X5 818 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CSNK1A1LQ8N752 337 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CAMKVQ8NCB2 501 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR1L3Q8NH93 324 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PIWIL2Q8TC59 973 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TWIST2Q8WVJ9 160 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC13A3Q8WWT9 602 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 N4BP2L2Q92802 583 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MTFMTQ96DP5 389 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ZNF317Q96PQ6 595 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MTERF1Q99551 399 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MS4A8Q9BY19 250 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TUBB1Q9H4B7 451 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FGF21Q9NSA1 209 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PSD3Q9NYI0 1048 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MARCOQ9UEW3 520 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PTPRBP23467 1997 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KIF26BQ2KJY2 2108 aa18.58■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MAGEB17A8MXT2 336 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 AGRPO00253 132 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 NDUFS4O43181 175 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CHEK2O96017 543 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 STATHP02808 62 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SERPINA6P08185 405 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC35G6P0C7Q6 338 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CCL4P13236 92 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HSD3B1P14060 373 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HSD3B2P26439 372 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RPS13P62277 151 aaKnown RBP18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MC2RQ01718 297 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HYAL2Q12891 473 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TARDBPQ13148 414 aaKnown RBP eCLIP18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PUM1Q14671 1186 aaKnown RBP eCLIP18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PRTGQ2VWP7 1150 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 WASHC2DQ5SRD0 308 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RAB11FIP2Q7L804 512 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GALNT15Q8N3T1 639 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR8K5Q8NH50 307 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR6C1Q96RD1 312 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC6A16Q9GZN6 736 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SPRTNQ9H040 489 aaPredicted RBP18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 BRF2Q9HAW0 419 aa18.57■□□□□ 0.56
MAP1LC3A-203ENST00000397709 A0A1W2PNU3 283 aaPredicted RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FITM1A5D6W6 292 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 TXNDC9O14530 226 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 EIF2S1P05198 315 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SERPIND1P05546 499 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FGF5P12034 268 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 LSP1P33241 339 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HK2P52789 917 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ITGA1P56199 1179 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GNGT1P63211 74 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 FOXM1Q08050 763 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RGS1Q08116 209 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CSTF3Q12996 717 aaKnown RBP18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HKDC1Q2TB90 917 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ADPRMQ3LIE5 342 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MANEAQ5SRI9 462 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CYB5D1Q6P9G0 228 aa18.56■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SCIMPQ6UWF3 145 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms