RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TAGLN3Q9UI15 199 aa26.31■■□□□ 1.8
CPNE1-203ENST00000397442 EIF3LQ9Y262 564 aaKnown RBP26.31■■□□□ 1.8
CPNE1-203ENST00000397442 ASXL3Q9C0F0 2248 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 B4GAT1O43505 415 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 CLEC3AO75596 197 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 BCKDHAP12694 445 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 ACPPP15309 386 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 GSTM2P28161 218 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 PRDX6P30041 224 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 RAE1P78406 368 aaKnown RBP26.3■■□□□ 1.8
CPNE1-203ENST00000397442 RELAQ04206 551 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 NKAIN2Q5VXU1 208 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 EID2Q8N6I1 236 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 C1orf52Q8N6N3 182 aaKnown RBP26.3■■□□□ 1.8
CPNE1-203ENST00000397442 SUMF1Q8NBK3 374 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 SEMA6CQ9H3T2 930 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 NMRK1Q9NWW6 199 aa26.3■■□□□ 1.8
CPNE1-203ENST00000397442 RPS15AP62244 130 aaKnown RBP26.29■■□□□ 1.8
CPNE1-203ENST00000397442 CYP4F3Q08477 520 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 ACSM2AQ08AH3 577 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 RPS6KA2Q15349 733 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 NR0B2Q15466 257 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 AGKQ53H12 422 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 DEPDC1Q5TB30 811 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 KHDRBS2Q5VWX1 349 aaKnown RBP26.29■■□□□ 1.8
CPNE1-203ENST00000397442 ACSM2BQ68CK6 577 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 NOXRED1Q6NXP6 359 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 IRGCQ6NXR0 463 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 LIX1Q8N485 282 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 TBC1D19Q8N5T2 526 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 AICDAQ9GZX7 198 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 SIRT5Q9NXA8 310 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 CCDC167Q9P0B6 97 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 EPHA6Q9UF33 1036 aa26.29■■□□□ 1.8
CPNE1-203ENST00000397442 LOC100653049A0A140TA62 436 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 LNP1A1A4G5 178 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 SAP18O00422 153 aaKnown RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CAPN5O15484 640 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 KRT34O76011 436 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 COX4I1P13073 169 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 ST6GAL1P15907 406 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CALB2P22676 271 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 ZFP36L2P47974 494 aaKnown RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 GFERP55789 205 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 UFM1P61960 85 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 TCF15Q12870 199 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 HYAL2Q12891 473 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 PTGR1Q14914 329 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 HERC3Q15034 1050 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 SPIN4Q56A73 249 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 GK5Q6ZS86 529 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 VN1R4Q7Z5H5 301 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 PARP9Q8IXQ6 854 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 METTL4Q8N3J2 472 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 PROKR1Q8TCW9 393 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CCDC74AQ96AQ1 378 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 TRAPPC9Q96Q05 1148 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 OR2A5Q96R48 311 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 LRFN3Q9BTN0 628 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 TUBB6Q9BUF5 446 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 PRM3Q9NNZ6 103 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 RUVBL1Q9Y265 456 aaKnown RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 RP1P56715 2156 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 WDR87Q6ZQQ6 2873 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 ESRRAP11474 423 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 SDC1P18827 310 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 TACR1P25103 407 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 HNRNPH2P55795 449 aaKnown RBP26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CFHR1Q03591 330 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CACHD1Q5VU97 1274 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 GALNT18Q6P9A2 607 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 SNX32Q86XE0 403 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 CMTM5Q96DZ9 223 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 F2RL3Q96RI0 385 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 MAP3K3Q99759 626 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 EPB41L1Q9H4G0 881 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 TXLNGQ9NUQ3 528 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 ZIM2Q9NZV7 527 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 BAIAP2L1Q9UHR4 511 aa26.28■■□□□ 1.8
CPNE1-203ENST00000397442 KIF1CO43896 1103 aaKnown RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 STATHP02808 62 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 ZNF883P0CG24 379 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 PNLIPP16233 465 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 CDH3P22223 829 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 HNRNPH1P31943 449 aaKnown RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 CPA2P48052 419 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 NCALDP61601 193 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 RALGAPA1Q6GYQ0 2036 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 GUSBP11Q6P575 273 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 Q8N9G6 341 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 TRPV3Q8NET8 790 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 PRSS33Q8NF86 280 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 OR6C4Q8NGE1 309 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 RP9Q8TA86 221 aaKnown RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 NCSTNQ92542 709 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 SLC7A6OSQ96CW6 309 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 MACROD1Q9BQ69 325 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 EBPLQ9BY08 206 aa26.27■■□□□ 1.8
CPNE1-203ENST00000397442 ZNF717Q9BY31 904 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-203ENST00000397442 C1GALT1Q9NS00 363 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms