RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 VTCN1Q7Z7D3 282 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 SLC15A3Q8IY34 581 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 HS3ST5Q8IZT8 346 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 GALNT15Q8N3T1 639 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 PIH1D2Q8WWB5 315 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 TMBIM1Q969X1 311 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 ZNF607Q96SK3 696 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 RPP25Q9BUL9 199 aaKnown RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 EFCAB11Q9BUY7 163 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 OR51V1Q9H2C8 321 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 SNNO75324 88 aaPredicted RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 UGT2B17O75795 530 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 SOX30O94993 753 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 IFNW1P05000 195 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 FABP3P05413 133 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 TFPIP10646 304 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 PRPS1L1P21108 318 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 NCF4Q15080 339 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 HNRNPA1L2Q32P51 320 aaKnown RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 PHF19Q5T6S3 580 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 ZC3H14Q6PJT7 736 aaKnown RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 TTC29Q8NA56 475 aaPredicted RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 MTERF3Q96E29 417 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 KLHDC7BQ96G42 594 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 AASSQ9UDR5 926 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 SAMD4AQ9UPU9 718 aaKnown RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 PLEKHM1Q9Y4G2 1056 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
IFT140-202ENST00000397417 MYOFQ9NZM1 2061 aa10.78□□□□□ -0.68
IFT140-202ENST00000397417 ARHGEF33A8MVX0 844 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 KMOO15229 486 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 ABLIM3O94929 683 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 OR6A2O95222 327 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 EBLN1P0CF75 366 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 LAMP1P11279 417 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 BMP7P18075 431 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 MLLT10P55197 1068 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 RNASE12Q5GAN4 147 aaKnown RBP10.77□□□□□ -0.68
IFT140-202ENST00000397417 CTSL3PQ5NE16 218 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 DCUN1D3Q8IWE4 304 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 DPP10Q8N608 796 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 NEIL2Q969S2 332 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 CENPNQ96H22 339 aaPredicted RBP10.77□□□□□ -0.68
IFT140-202ENST00000397417 GORASP1Q9BQQ3 440 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 IL20RAQ9UHF4 553 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 TPRKBQ9Y3C4 175 aa10.77□□□□□ -0.68
IFT140-202ENST00000397417 SLC35F4A4IF30 521 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 OR6B1O95007 311 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 BMP1P13497 986 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 ALOX12P18054 663 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 MYL12AP19105 171 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 TACR1P25103 407 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 NUP107P57740 925 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 ANGPT1Q15389 498 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 FAM92BQ6ZTR7 304 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 NUDT13Q86X67 352 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 LNX2Q8N448 690 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 RASGEF1AQ8N9B8 481 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 HHIPL1Q96JK4 782 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 TGM7Q96PF1 710 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 INPP5KQ9BT40 448 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 MKS1Q9NXB0 559 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 TVP23BQ9NYZ1 205 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 ASB1Q9Y576 335 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 H3BNC9 293 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 BCKDKO14874 412 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 ANGPTL1O95841 491 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 PNLIPRP1P54315 467 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 TARDBPQ13148 414 aaKnown RBP eCLIP10.77□□□□□ -0.695e-8■■■■■ 27.4
IFT140-202ENST00000397417 SNAPC1Q16533 368 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 COX18Q8N8Q8 333 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 OTUB2Q96DC9 234 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 SLC35G5Q96KT7 338 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 MRM3Q9HC36 420 aaKnown RBP10.77□□□□□ -0.69
IFT140-202ENST00000397417 TBC1D23Q9NUY8 699 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 SUCOQ9UBS9 1254 aaKnown RBP10.77□□□□□ -0.69
IFT140-202ENST00000397417 SARDHQ9UL12 918 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 MAU2Q9Y6X3 613 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 ACACAQ13085 2346 aa10.77□□□□□ -0.69
IFT140-202ENST00000397417 BMP10O95393 424 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 JUNDP17535 347 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 ADRA1AP35348 466 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 HNMTP50135 292 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 RPL26P61254 145 aaKnown RBP10.76□□□□□ -0.69
IFT140-202ENST00000397417 C1DQ13901 141 aaKnown RBP10.76□□□□□ -0.69
IFT140-202ENST00000397417 BHLHB9Q6PI77 547 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 LUZP2Q86TE4 346 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
IFT140-202ENST00000397417 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 ZNF382Q96SR6 550 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 OSBPL11Q9BXB4 747 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 OR8D2Q9GZM6 311 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 MRPS17Q9Y2R5 130 aaKnown RBP10.76□□□□□ -0.69
IFT140-202ENST00000397417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.76□□□□□ -0.69
IFT140-202ENST00000397417 ANTXRLA6NF34 631 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms