RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 NENFQ9UMX5 172 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ADAM18Q9Y3Q7 739 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 PEX16Q9Y5Y5 336 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ADGRB3O60242 1522 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 A0A1B0GVC2 190 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 H3BSH0 61 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ANKRD28O15084 1053 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 FAM155BO75949 473 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 CLDN7O95471 211 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 MYCLP1P12525 358 aaPredicted RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 NCK1P16333 377 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ENDOUP21128 410 aaKnown RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 LHCGRP22888 699 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 GSTT1P30711 240 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 SLC11A1P49279 550 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 CRISP1P54107 249 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 RBPJQ06330 500 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 MERTKQ12866 999 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 LASP1Q14847 261 aaKnown RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 TYSND1Q2T9J0 566 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ZNF782Q6ZMW2 699 aaPredicted RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 CBR4Q8N4T8 237 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 OR10G2Q8NGC3 310 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 NKD2Q969F2 451 aaPredicted RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 CENPNQ96H22 339 aaPredicted RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 CDKN2AIPNLQ96HQ2 116 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 ARL5BQ96KC2 179 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 CADM1Q9BY67 442 aaKnown RBP6.99□□□□□ -1.29
UPF2-203ENST00000397053 SFXN1Q9H9B4 322 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 USP29Q9HBJ7 922 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 TAS2R9Q9NYW1 312 aa6.99□□□□□ -1.29
UPF2-203ENST00000397053 LOC100509620A0A075B734 347 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 BCHEP06276 602 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 BMP4P12644 408 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FBLP22087 321 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 SLC6A6P31641 620 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 BDKRB1P46663 353 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 NR0B1P51843 470 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 IST1P53990 364 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 MTPNP58546 118 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 RPS21P63220 83 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 HSD11B2P80365 405 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 PLCXD2Q0VAA5 305 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ADGRE1Q14246 886 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 GRK1Q15835 563 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 AKAP14Q86UN6 197 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FUKQ8N0W3 1084 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 PGAM4Q8N0Y7 254 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 SVOPLQ8N434 492 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FBXL16Q8N461 479 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 NLGN4YQ8NFZ3 816 aaPredicted RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 C16orf58Q96GQ5 468 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 CITED4Q96RK1 184 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 IL4I1Q96RQ9 567 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 GRHL1Q9NZI5 618 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ACSL5Q9ULC5 683 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ZNF175Q9Y473 711 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 PCDHGA2Q9Y5H1 932 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 PMF1-BGLAPU3KQ54 211 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 A0A1W2PP55 124 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 SAGE2PA6NJ88 616 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 BTNL10A8MVZ5 291 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FTCDNL1E5RQL4 147 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 J3QRK9 145 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 CLIC1O00299 241 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 THBS2P35442 1172 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FXYD6P3P58550 94 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 GPR17Q13304 367 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 FASTKD3Q14CZ7 662 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 CA9Q16790 459 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 AGTRAPQ6RW13 159 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ARHGAP22Q7Z5H3 698 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 SLC51AQ86UW1 340 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 IL17RCQ8NAC3 791 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 RCBTB1Q8NDN9 531 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 TRIM43Q96BQ3 446 aaPredicted RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 TPSD1Q9BZJ3 242 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 SDCBP2Q9H190 292 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 TFB2MQ9H5Q4 396 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 MS4A12Q9NXJ0 267 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 GPRC5BQ9NZH0 403 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ALG5Q9Y673 324 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 ATE1O95260 518 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 OPN1SWP03999 348 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 SOD2P04179 222 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 CSF2RAP15509 400 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 S1PR1P21453 382 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 CDKN2BP42772 138 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 OR2B6P58173 313 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 DSC1Q08554 894 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 AIMP2Q13155 320 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 LACTB2Q53H82 288 aaPredicted RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 Q6ZVL8 140 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 ERN2Q76MJ5 926 aaKnown RBP6.98□□□□□ -1.29
UPF2-203ENST00000397053 TMED4Q7Z7H5 227 aa6.98□□□□□ -1.29
UPF2-203ENST00000397053 LGI4Q8N135 537 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms