RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ZNF37AP17032 561 aaPredicted RBP9.87□□□□□ -0.83
NEDD8-202ENST00000396828 OR1D4P47884 311 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 RAB28P51157 221 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CLCN7P51798 805 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SOX8P57073 446 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 IRF9Q00978 393 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 TIAL1Q01085 375 aaKnown RBP eCLIP9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CSHL1Q14406 222 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 ZNF460Q14592 562 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 KIR2DS3Q14952 304 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 ACAP2Q15057 778 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 NKG7Q16617 165 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SYTL3Q4VX76 610 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 HHATQ5VTY9 493 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 TLDC1Q6P9B6 456 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 PAQR3Q6TCH7 311 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 HPS6Q86YV9 775 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CCDC63Q8NA47 563 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CLEC1AQ8NC01 280 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CD200R1Q8TD46 325 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 DYDC1Q8WWB3 177 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 ASZ1Q8WWH4 475 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SCYL1Q96KG9 808 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 UBXN10Q96LJ8 280 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 FER1L6-AS2Q96M78 137 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SPSB2Q99619 263 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SLC6A20Q9NP91 592 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 TXLNGQ9NUQ3 528 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 INTS9Q9NV88 658 aaKnown RBP9.87□□□□□ -0.83
NEDD8-202ENST00000396828 MID2Q9UJV3 735 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 FBXL4Q9UKA2 621 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 G3BP2Q9UN86 482 aaKnown RBP9.87□□□□□ -0.83
NEDD8-202ENST00000396828 MED16Q9Y2X0 877 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 PLLPQ9Y342 182 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 POLEQ07864 2286 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CNTRLQ7Z7A1 2325 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CREBBPQ92793 2442 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 CCDC189A1A4V9 331 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 ANKUB1A6NFN9 424 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 EIF3FO00303 357 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PEX12O00623 359 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PRICKLE3O43900 615 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 CTSVO60911 334 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 RBP1P09455 135 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 ENO3P13929 434 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 AOAHP28039 575 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PSMB5P28074 263 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 DCTP40126 519 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 GLRBP48167 497 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PGGT1BP53609 377 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 ATP6V0D1P61421 351 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PLOD1Q02809 727 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 Q0VFX4 171 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 TUBB8Q3ZCM7 444 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 FRMPD2BQ6IN97 320 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 KIRREL2Q6UWL6 708 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 OVCH1Q7RTY7 1134 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 CPNE9Q8IYJ1 553 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 CENPLQ8N0S6 344 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 MYO1HQ8N1T3 1032 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PLD6Q8N2A8 252 aaKnown RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 RDH11Q8TC12 318 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 MGARPQ8TDB4 240 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 NXNL1Q96CM4 212 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 LINGO1Q96FE5 620 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 IP6K3Q96PC2 410 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 FAM111AQ96PZ2 611 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 PAIP2Q9BPZ3 127 aaKnown RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 C17orf62Q9BQA9 187 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 MRPL57Q9BQC6 102 aaKnown RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 NDC1Q9BTX1 674 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 DERL2Q9GZP9 239 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 ILKAPQ9H0C8 392 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 SOX17Q9H6I2 414 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 SYNPO2LQ9H987 977 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 ATP13A2Q9NQ11 1180 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 IGSF5Q9NSI5 407 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 TMEM216Q9P0N5 145 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 SLC17A7Q9P2U7 560 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 GALPQ9UBC7 116 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 CTSFQ9UBX1 484 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 SRPK3Q9UPE1 567 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 HS3ST3B1Q9Y662 390 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 COPG1Q9Y678 874 aaKnown RBP9.86□□□□□ -0.83
NEDD8-202ENST00000396828 MAU2Q9Y6X3 613 aa9.86□□□□□ -0.83
NEDD8-202ENST00000396828 A0A1B0GX78 115 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 PLIN3O60664 434 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 DDAH2O95865 285 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 ONECUT2O95948 504 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 NEFHP12036 1026 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 TAC1P20366 129 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 MMP11P24347 488 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 ITGA3P26006 1051 aa9.85□□□□□ -0.83
NEDD8-202ENST00000396828 MPP2Q14168 576 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms