RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 FEZF1A0PJY2 475 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 SLC35G6P0C7Q6 338 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 PRPS2P11908 318 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 CALB2P22676 271 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 MRPL19P49406 292 aaKnown RBP13.11□□□□□ -0.31
VAPB-202ENST00000395802 ACADVLP49748 655 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 STXBP1P61764 594 aaKnown RBP13.11□□□□□ -0.31
VAPB-202ENST00000395802 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
VAPB-202ENST00000395802 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
VAPB-202ENST00000395802 YBX1P67809 324 aaKnown RBP13.11□□□□□ -0.31
VAPB-202ENST00000395802 RGS1Q08116 209 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 PWP1Q13610 501 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 MANEAQ5SRI9 462 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 SUMF1Q8NBK3 374 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 ZNF740Q8NDX6 193 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 ZFYVE21Q9BQ24 234 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 NLNQ9BYT8 704 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 CHRNA10Q9GZZ6 450 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 ABCG4Q9H172 646 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
VAPB-202ENST00000395802 LAMA1P25391 3075 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 TXNDC9O14530 226 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 HAT1O14929 419 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 PRDX6P30041 224 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 TSFMP43897 325 aaKnown RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 TCF15Q12870 199 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 CCDC6Q16204 474 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 RFTN2Q52LD8 501 aaPredicted RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 PDCD4Q53EL6 469 aaKnown RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 KHDRBS2Q5VWX1 349 aaKnown RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 DBX2Q6ZNG2 339 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 SPRED1Q7Z699 444 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 CAMKVQ8NCB2 501 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 CCDC74AQ96AQ1 378 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 BRINP2Q9C0B6 783 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 ZNF385DQ9H6B1 395 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 SDR39U1Q9NRG7 319 aaPredicted RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 SIRT5Q9NXA8 310 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 COPG1Q9Y678 874 aaKnown RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
VAPB-202ENST00000395802 VPS13AQ96RL7 3174 aa13.1□□□□□ -0.31
VAPB-202ENST00000395802 PSMD12O00232 456 aaPredicted RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 ZSCAN9O15535 394 aaPredicted RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 TGFB1P01137 390 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 THRAP10827 490 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 GSTM5P46439 218 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 RAP1GDS1P52306 607 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 OR1D5P58170 312 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 KIAA0040Q15053 153 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 DEPDC1Q5TB30 811 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 IL23RQ5VWK5 629 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 GALNT18Q6P9A2 607 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 FAM20CQ8IXL6 584 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 C19orf47Q8N9M1 422 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 RP9Q8TA86 221 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 SLC13A3Q8WWT9 602 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 STARD8Q92502 1023 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 RGMAQ96B86 450 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 MS4A8Q9BY19 250 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 REXO4Q9GZR2 422 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 AIG1Q9NVV5 245 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 ZIM2Q9NZV7 527 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 A0A088AWK7 358 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 ARHGAP10A1A4S6 786 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 DYTNA2CJ06 578 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 CFAP73A6NFT4 308 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 NDUFS4O43181 175 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 SRPX2O60687 465 aaPredicted RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 RASSF9O75901 435 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 SERPIND1P05546 499 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 ZNF10P21506 573 aaPredicted RBP13.09□□□□□ -0.31
VAPB-202ENST00000395802 BCL6P41182 706 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 ARL4DP49703 201 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 FCRL6Q6DN72 434 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 ASPGQ86U10 573 aa13.09□□□□□ -0.31
VAPB-202ENST00000395802 TRIM73Q86UV7 250 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms