RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 FAM221AA4D161 298 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 GRID2IPA4D2P6 1211 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 FOXO6A8MYZ6 492 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 E7ENX8 843 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 SMAPO00193 183 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 SLC16A8O95907 504 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 ARNTP27540 789 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 TPP2P29144 1249 aaPredicted RBP14.86□□□□□ -0.03
SNCA-205ENST00000394991 FMO4P31512 558 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 PTGS2P35354 604 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 FDFT1P37268 417 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 BCL6P41182 706 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 SLC26A5P58743 744 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 CRADDP78560 199 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 ABATP80404 500 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 TAP2Q03519 686 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 KCNJ11Q14654 390 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 ABRAXAS2Q15018 415 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 KLHL38Q2WGJ6 581 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 PCGF5Q86SE9 256 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 PDSS2Q86YH6 399 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 LRRC56Q8IYG6 542 aaPredicted RBP14.86□□□□□ -0.03
SNCA-205ENST00000394991 ASB5Q8WWX0 329 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 LPGAT1Q92604 370 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 LPAR4Q99677 370 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 LANCL2Q9NS86 450 aa14.86□□□□□ -0.03
SNCA-205ENST00000394991 HRNRQ86YZ3 2850 aaPredicted RBP14.86□□□□□ -0.03
SNCA-205ENST00000394991 H7BY64 318 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 NDC80O14777 642 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 RDH16O75452 317 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 CDC123O75794 336 aaPredicted RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 PTMAP06454 111 aaKnown RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 ETS1P14921 441 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 NMBRP28336 390 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 CHRNB4P30926 498 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 RFC3P40938 356 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 MEOX1P50221 254 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 TAS2R50P59544 299 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 SPA17Q15506 151 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 PCID2Q5JVF3 399 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 TMEM214Q6NUQ4 689 aaKnown RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 RPS19BP1Q86WX3 136 aaKnown RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 CCDC71Q8IV32 467 aaPredicted RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 PLPP5Q8NEB5 264 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 ZCCHC10Q8TBK6 192 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 ELP5Q8TE02 316 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 PRAP1Q96NZ9 151 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 FOXC2Q99958 501 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 TRIM45Q9H8W5 580 aaPredicted RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 FAM114A2Q9NRY5 505 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 KCNN3Q9UGI6 736 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
SNCA-205ENST00000394991 FBN3Q75N90 2809 aa14.85□□□□□ -0.03
SNCA-205ENST00000394991 E7EVH7 732 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 TFECO14948 347 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 HOXD4P09016 255 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 KLK2P20151 261 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 HSD17B2P37059 387 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 NR0B1P51843 470 aaKnown RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 ITGA8P53708 1063 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 NAP1L1P55209 391 aaKnown RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 SESN2P58004 480 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 ACTN3Q08043 901 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 OASLQ15646 514 aaKnown RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 NSDHLQ15738 373 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 TYSND1Q2T9J0 566 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 CMPK2Q5EBM0 449 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 CCDC170Q8IYT3 715 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 OTUD6BQ8N6M0 293 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 KCT2Q8NC54 265 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 MCOLN3Q8TDD5 553 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 PEX11GQ96HA9 241 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 SLC30A3Q99726 388 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 GSX1Q9H4S2 264 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 RAB6BQ9NRW1 208 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 CCM2LQ9NUG4 571 aaPredicted RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 SH2B3Q9UQQ2 575 aa14.84□□□□□ -0.03
SNCA-205ENST00000394991 REXO2Q9Y3B8 237 aaKnown RBP14.84□□□□□ -0.03
SNCA-205ENST00000394991 KCNE1BA0A087WTH5 132 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 A0A1B0GTL3 188 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 ZNF860A6NHJ4 632 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 ZNF839A8K0R7 811 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 MAGEB17A8MXT2 336 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 GOLGA8KD6RF30 607 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 HS6ST1O60243 411 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 KIF5CO60282 957 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 CDC40O60508 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNCA-205ENST00000394991 IFNB1P01574 187 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 APRTP07741 180 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 TFEBP19484 476 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 CHRM3P20309 590 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 CYLC1P35663 651 aaPredicted RBP14.83□□□□□ -0.04
SNCA-205ENST00000394991 CYB561P49447 251 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 OR4D2P58180 307 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 MLF1P58340 268 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 EMC4Q5J8M3 183 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 TMEM211Q6ICI0 200 aa14.83□□□□□ -0.04
SNCA-205ENST00000394991 REXO1L1PQ8IX06 675 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms