RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 GOLGA7Q7Z5G4 137 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 LCA5Q86VQ0 697 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 TBC1D19Q8N5T2 526 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 CAMKVQ8NCB2 501 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 PTCD3Q96EY7 689 aaKnown RBP18.95■□□□□ 0.62
SNCA-203ENST00000394986 NSUN5Q96P11 429 aaKnown RBP18.95■□□□□ 0.62
SNCA-203ENST00000394986 NLNQ9BYT8 704 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 DCDC2Q9UHG0 476 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 ZFP69BQ9UJL9 534 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 KCND3Q9UK17 655 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 FARSAQ9Y285 508 aaKnown RBP18.95■□□□□ 0.62
SNCA-203ENST00000394986 PCDHGA6Q9Y5G7 932 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 A0A0A6YYC8 382 aaPredicted RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 C9J4A7 227 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 STX16-NPEPL1H3BU86 382 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 I3L1I5 382 aaPredicted RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 TXNDC9O14530 226 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 STX16O14662 325 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 FFAR3O14843 346 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 GPR42O15529 346 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 FOXS1O43638 330 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 H2AFYO75367 372 aaKnown RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 SLC35G6P0C7Q6 338 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 PTPN4P29074 926 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 RPS15P62841 145 aaKnown RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 GTF2H2Q13888 395 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 KRT71Q3SY84 523 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 GARNL3Q5VVW2 1013 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TMEM214Q6NUQ4 689 aaKnown RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 GTF2H2CQ6P1K8 395 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TMIGD1Q6UXZ0 262 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TRABD2AQ86V40 505 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 SRRM1Q8IYB3 904 aaKnown RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 WDR34Q96EX3 536 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 ZIM3Q96PE6 472 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 EFHD1Q9BUP0 239 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TMEM109Q9BVC6 243 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 EHD1Q9H4M9 534 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 PCTPQ9UKL6 214 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TMCO1Q9UM00 188 aa18.94■□□□□ 0.62
SNCA-203ENST00000394986 TNPO3Q9Y5L0 923 aaKnown RBP18.94■□□□□ 0.62
SNCA-203ENST00000394986 CCDC151A5D8V7 595 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 COPEO14579 308 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 DLX3O60479 287 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 ERLIN1O75477 346 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 RAB40ALP0C0E4 278 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 IL1RNP18510 177 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 CXCR2P25025 360 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 AHRP35869 848 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 EMP3P54852 163 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 SHISA5Q8N114 240 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 KRT78Q8N1N4 520 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 ZSCAN1Q8NBB4 408 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 OR9A4Q8NGU2 314 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 EFCAB11Q9BUY7 163 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 GPR87Q9BY21 358 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 DRC3Q9H069 523 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 IPPKQ9H8X2 491 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 CTSFQ9UBX1 484 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 GPN3Q9UHW5 284 aaPredicted RBP18.93■□□□□ 0.62
SNCA-203ENST00000394986 ZNF490Q9ULM2 529 aaPredicted RBP18.93■□□□□ 0.62
SNCA-203ENST00000394986 FER1L5A0AVI2 2057 aa18.93■□□□□ 0.62
SNCA-203ENST00000394986 ZNF891A8MT65 544 aaPredicted RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 WFS1O76024 890 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 B3GALT4O96024 378 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 PROCP04070 461 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 RPS17P08708 135 aaKnown RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 FURINP09958 794 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 TAC1P20366 129 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 HNF4AP41235 474 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 SLC18A2Q05940 514 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 IL10RAQ13651 578 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 ERV3-1Q14264 604 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 NDUFA9Q16795 377 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 BEND6Q5SZJ8 279 aaPredicted RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 MRPL14Q6P1L8 145 aaKnown RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 VN1R5Q7Z5H4 357 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 MYLK4Q86YV6 388 aaPredicted RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 IQCKQ8N0W5 287 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 NT5CQ8TCD5 201 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 CREB3L4Q8TEY5 395 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 CCT6BQ92526 530 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 COL26A1Q96A83 441 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 MMABQ96EY8 250 aaPredicted RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 TMEM237Q96Q45 408 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 AICDAQ9GZX7 198 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 ZBTB26Q9HCK0 441 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 ZNF304Q9HCX3 659 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 TCFL5Q9UL49 500 aa18.92■□□□□ 0.62
SNCA-203ENST00000394986 MDC1Q14676 2089 aaKnown RBP18.92■□□□□ 0.62
SNCA-203ENST00000394986 C4orf51C9J302 202 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 OR7A17O14581 309 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CREG1O75629 220 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 KLF7O75840 302 aaPredicted RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 TSPAN8P19075 237 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 FBLP22087 321 aaKnown RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 CRHR1P34998 444 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CASP2P42575 452 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CCT5P48643 541 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 MAT1AQ00266 395 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms