RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CBLBQ13191 982 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 TJAP1Q5JTD0 557 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 RRM2BQ7LG56 351 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 DGLUCYQ7Z3D6 616 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 AQP12AQ8IXF9 295 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 ADGRG5Q8IZF4 528 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 DDHD1Q8NEL9 900 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 RPLP0P6Q8NHW5 317 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 CMTM7Q96FZ5 175 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 MUS81Q96NY9 551 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 OR4K3Q96R72 315 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 CCDC3Q9BQI4 270 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 BTBD3Q9Y2F9 522 aa15.31■□□□□ 0.04
SMARCD1-202ENST00000394963 DNAH14Q0VDD8 3507 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 CKAP5Q14008 2032 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 LIN7AO14910 233 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 C1GALT1C1LP0DN25 315 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ALDH4A1P30038 563 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 CDH12P55289 794 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 GRSF1Q12849 480 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 CDKN3Q16667 212 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 XKR7Q5GH72 579 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TAF8Q7Z7C8 310 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 FAM9CQ8IZT9 166 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 LZICQ8WZA0 190 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 THAP11Q96EK4 314 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 NTMT1Q9BV86 223 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF385DQ9H6B1 395 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ADPRHL2Q9NX46 363 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 MAFFQ9ULX9 164 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 DOCK9Q9BZ29 2069 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TCRBV21S2A2A0A5A6 115 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 GABRR3A8MPY1 467 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ZW10O43264 779 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PRAMEF4O60810 478 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 POLR2CP19387 275 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ATP4BP51164 291 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 OLR1P78380 273 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TAP2Q03519 686 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 IRF4Q15306 451 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PRSS36Q5K4E3 855 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PRAMEF9Q5VWM5 478 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PNCKQ6P2M8 343 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 GLB1L3Q8NCI6 653 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 SLCO4A1Q96BD0 722 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 RIPOR3Q96MK2 946 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC29A3Q9BZD2 475 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 ACTL8Q9H568 366 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TSC2P49815 1807 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TRBV5-4A0A0C4DH59 114 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 RAP2AP10114 183 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PIM1P11309 404 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 LAMP2P13473 410 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 AMD1P17707 334 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PSMB9P28065 219 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TMED1Q13445 227 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 EIF4HQ15056 248 aaKnown RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 GPAT3Q53EU6 434 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 HMBOX1Q6NT76 420 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 TMEFF1Q8IYR6 380 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 NFKBIDQ8NI38 313 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 HM13Q8TCT9 377 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 LRIG1Q96JA1 1093 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 IMPAD1Q9NX62 359 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PPT2Q9UMR5 302 aa15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 PCYT1BQ9Y5K3 369 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-202ENST00000394963 NR2F1P10589 423 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CD22P20273 847 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 FUT4P22083 530 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 BUD31P41223 144 aaPredicted RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 PRLHRP49683 370 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CLDN8P56748 225 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 NAA20P61599 178 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 TFF2Q03403 129 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 NAGSQ8N159 534 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ANKRA2Q9H9E1 313 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CACYBPQ9HB71 228 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ATAD3AQ9NVI7 634 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 GULP1Q9UBP9 304 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 PRSS51A0A1B0GVH4 220 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC28A2O43868 658 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ACPPP15309 386 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ACSL1P33121 698 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 RAD23AP54725 363 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 MEP1AQ16819 746 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 PRSS58Q8IYP2 241 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 PATE1Q8WXA2 126 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF583Q96ND8 569 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 DPH7Q9BTV6 452 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 C1QTNF7Q9BXJ2 289 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF556Q9HAH1 456 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 MRPS30Q9NP92 439 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 UNC13CQ8NB66 2214 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 AHCTF1Q8WYP5 2266 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 GMFGO60234 142 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 AP2A2O94973 939 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CHRM5P08912 532 aaPredicted RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 THRBP10828 461 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms