RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TCEAL4Q96EI5 215 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 RNFT2Q96EX2 444 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SLC47A1Q96FL8 570 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 LRIG1Q96JA1 1093 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PPP3R2Q96LZ3 170 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 C20orf27Q9GZN8 174 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SERHL2Q9H4I8 314 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ARNT2Q9HBZ2 717 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SERHLQ9NQF3 203 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ADGRE2Q9UHX3 823 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ZDHHC2Q9UIJ5 367 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SLC13A4Q9UKG4 626 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PCDHGA8Q9Y5G5 932 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 LYVE1Q9Y5Y7 322 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SDK1Q7Z5N4 2213 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PLXNA1Q9UIW2 1896 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 GNG14A0A1W2PPG7 69 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR2AG2A6NM03 316 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 H3BM21 787 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 STK16O75716 305 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SLITRK5O94991 958 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 IFNA14P01570 189 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 TRBC1P01850 177 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 KLKB1P03952 638 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ALDOAP04075 364 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 PDGFAP04085 211 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HTR1BP28222 390 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ETV1P50549 477 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MVKQ03426 396 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 RPA4Q13156 261 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 BTN1A1Q13410 526 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 SWI5Q1ZZU3 235 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 ITPRIPL2Q3MIP1 535 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 VITQ6UXI7 678 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PM20D2Q8IYS1 436 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 CPSF7Q8N684 471 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 OR8K3Q8NH51 312 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 MAPK15Q8TD08 544 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 C19orf60Q96EN9 201 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 OTUB1Q96FW1 271 aaPredicted RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 REXO5Q96IC2 774 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 PSD2Q9BQI7 771 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 DHRS4Q9BTZ2 278 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 PPIL3Q9H2H8 161 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 DNMT3BQ9UBC3 853 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 EIF3KQ9UBQ5 218 aaKnown RBP5.52□□□□□ -1.53
RFFL-202ENST00000394597 B4GALT6Q9UBX8 382 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 BTRCQ9Y297 605 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 HCFC2Q9Y5Z7 792 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 STON1Q9Y6Q2 735 aa5.52□□□□□ -1.53
RFFL-202ENST00000394597 RLFQ13129 1914 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 LOC100130705A0A1B0GUX0 176 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 FAM92AA1XBS5 289 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 ACOX3O15254 700 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 DLX3O60479 287 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 TULP3O75386 442 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 S1PR4O95977 384 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SRPRAP08240 638 aaKnown RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 LINC00032P0C843 101 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 RPL6Q02878 288 aaKnown RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 LCP2Q13094 533 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 PRKG2Q13237 762 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 FAM205BPQ63HN1 556 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 CLEC6AQ6EIG7 209 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SCIMPQ6UWF3 145 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 GAREM2Q75VX8 874 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 ZNF438Q7Z4V0 828 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 FAM124AQ86V42 546 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 CFAP206Q8IYR0 622 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 HDDC3Q8N4P3 179 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 AADATQ8N5Z0 425 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 BEND7Q8N7W2 519 aaPredicted RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 MFSD2AQ8NA29 543 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 UXS1Q8NBZ7 420 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SLC37A3Q8NCC5 494 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 OR2T12Q8NG77 320 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 CLHC1Q8NHS4 586 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SLC22A8Q8TCC7 542 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 CLP1Q92989 425 aaKnown RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 FATE1Q969F0 183 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 UBE2E3Q969T4 207 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 ZUFSPQ96AP4 578 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 ZNF285Q96NJ3 590 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 RIOK2Q9BVS4 552 aaKnown RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 ITPAQ9BY32 194 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 PCDHB16Q9NRJ7 776 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SNTG1Q9NSN8 517 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 CXXC1Q9P0U4 656 aaPredicted RBP5.51□□□□□ -1.53
RFFL-202ENST00000394597 RIMKLBQ9ULI2 386 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 SSR3Q9UNL2 185 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 ACTL7AQ9Y615 435 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 MAU2Q9Y6X3 613 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 OTOFQ9HC10 1997 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 LOC285095A0A1B0GVY8 99 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 FFAR3O14843 346 aa5.51□□□□□ -1.53
RFFL-202ENST00000394597 TP73O15350 636 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms