RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RFPL1O75677 317 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 S100BP04271 92 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZGLP1P0C6A0 271 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 EPORP19235 508 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 HRH2P25021 359 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TYK2P29597 1187 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 GRK3P35626 688 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 MSH2P43246 934 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SCTRP47872 440 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 HNMTP50135 292 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 KLC1Q07866 573 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 CDC16Q13042 620 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 RBBP5Q15291 538 aaKnown RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM219BQ5XKK7 198 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TMEM214Q6NUQ4 689 aaKnown RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRMT9Q6P2P2 845 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLCO4C1Q6ZQN7 724 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 LAPTM4BQ86VI4 370 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 RAB43Q86YS6 212 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZC3H7AQ8IWR0 971 aaKnown RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 PDPRQ8NCN5 879 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 LSM14AQ8ND56 463 aaKnown RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR4K1Q8NGD4 311 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR5T3Q8NGG3 340 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 C9orf43Q8TAL5 461 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 STT3BQ8TCJ2 826 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC13A3Q8WWT9 602 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 THAP4Q8WY91 577 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 FKBP10Q96AY3 582 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 MIEF2Q96C03 454 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 C8orf44Q96CB5 159 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TM4SF19Q96DZ7 209 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 GPR78Q96P69 363 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ATOH8Q96SQ7 321 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 C17orf62Q9BQA9 187 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 CRB3Q9BUF7 120 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TXLNGYQ9BZA5 131 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 AICDAQ9GZX7 198 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 DRC3Q9H069 523 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 TSPYL1Q9H0U9 437 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC25A18Q9H1K4 315 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 WDR54Q9H977 334 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 PELI2Q9HAT8 420 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 NMRAL1Q9HBL8 299 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ACSS2Q9NR19 701 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 DNAJC11Q9NVH1 559 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 P4HTMQ9NXG6 502 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 NUDT4Q9NZJ9 180 aa7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF282Q9UDV7 671 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P1-201ENST00000393368 CACNA1GO43497 2377 aa7.27□□□□□ -1.24
HMGB3P1-201ENST00000393368 SPTBP11277 2137 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KCNE1BA0A087WTH5 132 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 A0A0G2JN53 185 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SOCS6O14544 535 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 STK16O75716 305 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CDC123O75794 336 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLHL18O94889 574 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLHL2O95198 593 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 ONECUT2O95948 504 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 RECKO95980 971 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SHBGP04278 402 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC35G6P0C7Q6 338 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF888P0CJ79 500 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 PIM1P11309 404 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 MTHFD2P13995 350 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 GNAZP19086 355 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CD22P20273 847 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC26A3P40879 764 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 MAGEA12P43365 314 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 AVPR1BP47901 424 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 RAB8AP61006 207 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 RELAQ04206 551 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 OCA2Q04671 838 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 EEF1A2Q05639 463 aaKnown RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 C19orf57Q0VDD7 668 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 HYAL2Q12891 473 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 ILF2Q12905 390 aaKnown RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC29A2Q14542 456 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SSPNQ14714 243 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 PDK4Q16654 411 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAM83EQ2M2I3 478 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 DEFB134Q4QY38 66 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 LACTB2Q53H82 288 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 TOR1AIP1Q5JTV8 583 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 GARNL3Q5VVW2 1013 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 ATG9BQ674R7 924 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 SULT1C3Q6IMI6 304 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 PRICKLE2Q7Z3G6 844 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 APLFQ8IW19 511 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLHDC8AQ8IYD2 350 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 TCAIMQ8N3R3 496 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CAMKVQ8NCB2 501 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 FDCSPQ8NFU4 85 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 STAG3L4Q8TBR4 150 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 CCT6BQ92526 530 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 AIF1LQ9BQI0 150 aa7.27□□□□□ -1.25
HMGB3P1-201ENST00000393368 NUDT9Q9BW91 350 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms