RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 MFSD11O43934 449 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 FKTNO75072 461 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 GLUD1P00367 558 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 PRKCIP41743 596 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 IDH3GP51553 393 aaPredicted RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 C4orf17Q53FE4 359 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 KCTD18Q6PI47 426 aaPredicted RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 SPPL2CQ8IUH8 684 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 PDZD9Q8IXQ8 264 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 LNX1Q8TBB1 728 aaPredicted RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 RRNAD1Q96FB5 475 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 LCHNA4D1U4 455 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 CDC7O00311 574 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 ST3GAL3Q11203 375 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 GCDHQ92947 438 aaPredicted RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 GTPBP3Q969Y2 492 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 PIWIL1Q96J94 861 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 HEATR1Q9H583 2144 aaKnown RBP14.34□□□□□ -0.11
CCDC50-201ENST00000392455 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 PHYHO14832 338 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 VEGFDO43915 354 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 FOXRED2Q8IWF2 684 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 GOLM1Q8NBJ4 401 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 APOLD1Q96LR9 279 aa14.34□□□□□ -0.11
CCDC50-201ENST00000392455 COL1A2P08123 1366 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 PTGER3P43115 390 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 PCK2Q16822 640 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 NIPAL3Q6P499 406 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 FAM129CQ86XR2 697 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.11
CCDC50-201ENST00000392455 OSER1Q9NX31 292 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 B4GALT7Q9UBV7 327 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 KCNS2Q9ULS6 477 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 GMDSO60547 372 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 SLITRK5O94991 958 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 AQP1P29972 269 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 RHBDF2Q6PJF5 856 aa14.33□□□□□ -0.11
CCDC50-201ENST00000392455 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.11
CCDC50-201ENST00000392455 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.11
CCDC50-201ENST00000392455 SHOXO15266 292 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 MSI1O43347 362 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 SYNGR4O95473 234 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 DNAJB1P25685 340 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TPRG1LQ5T0D9 272 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 GBA3Q9H227 469 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FAM198AQ9UFP1 575 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FBXO7Q9Y3I1 522 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TCRBV9S1A1TA0A576 114 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 H1F0P07305 194 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FMO1Q01740 532 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 SEMA3AQ14563 771 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 REP15Q6BDI9 236 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 OR56A1Q8NGH5 318 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 LMLNQ96KR4 655 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 SECISBP2Q96T21 854 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ST14Q9Y5Y6 855 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 B4GALT5O43286 388 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 KLK3P07288 261 aaPredicted RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 OR1D2P34982 312 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ALDH3B1P43353 468 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TAS2R20P59543 309 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 MMAAQ8IVH4 418 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 MMP27Q9H306 513 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 F5H0A9 414 aaPredicted RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 OR1F1O43749 312 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 GNB3P16520 340 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 CD79BP40259 229 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ADGRE1Q14246 886 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 DPYSL2Q16555 572 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FKBP1CQ5VVH2 108 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ERN2Q76MJ5 926 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 CLNKQ7Z7G1 428 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TMEM41AQ96HV5 264 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 USB1Q9BQ65 265 aaKnown RBP14.33□□□□□ -0.12
CCDC50-201ENST00000392455 SRMSQ9H3Y6 488 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 COL20A1Q9P218 1284 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 BACE2Q9Y5Z0 518 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FFAR2O15552 330 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 FLRT2O43155 660 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ESR1P03372 595 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 CBSLP0DN79 551 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 CBSP35520 551 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 NUDT13Q86X67 352 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 DMRTB1Q96MA1 342 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 RBP7Q96R05 134 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TTPALQ9BTX7 342 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 RNF38Q9H0F5 515 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 TP53TG5Q9Y2B4 290 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 HSPB11Q9Y547 144 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 PTPRJQ12913 1337 aa14.33□□□□□ -0.12
CCDC50-201ENST00000392455 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 ETS2P15036 469 aa14.32□□□□□ -0.12
CCDC50-201ENST00000392455 CCND3P30281 292 aaPredicted RBP14.32□□□□□ -0.12
CCDC50-201ENST00000392455 NR4A2P43354 598 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms