RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 MGAT5Q09328 741 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 CSHL1Q14406 222 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 PCOLCEQ15113 449 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 EXT1Q16394 746 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 ABHD17BQ5VST6 288 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 PLAG1Q6DJT9 500 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 CYS1Q717R9 158 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 KLHL7Q8IXQ5 586 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 M1APQ8TC57 530 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 ZNF354BQ96LW1 612 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 CAPS2Q9BXY5 557 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 SYNPO2LQ9H987 977 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 MOCS1Q9NZB8 636 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 CSAG2Q9Y5P2 127 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 COL12A1Q99715 3063 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
TRBV4-1-201ENST00000390357 A0A1B0GUH1 482 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 FEZF1A0PJY2 475 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 E7ESA3 106 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 OR1F1O43749 312 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 SEC31AO94979 1220 aaKnown RBP12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 LDLRP01130 860 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 F7P08709 466 aaPredicted RBP12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CDH1P12830 882 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 XCR1P46094 333 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 EEF1A2Q05639 463 aaKnown RBP12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 RGS1Q08116 209 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 PHKG1Q16816 387 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 SYT16Q17RD7 645 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 MFSD4BQ5TF39 518 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 FAAH2Q6GMR7 532 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 H3F3CQ6NXT2 135 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 MAATS1Q7Z4T9 603 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 KCT2Q8NC54 265 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CATSPER1Q8NEC5 780 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CFAP36Q96G28 342 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 KCNF1Q9H3M0 494 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 ZFP69BQ9UJL9 534 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 ERRFI1Q9UJM3 462 aaPredicted RBP12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 DYRK1BQ9Y463 629 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 KCNE2Q9Y6J6 123 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 CPAMD8Q8IZJ3 1885 aa12.85□□□□□ -0.35
TRBV4-1-201ENST00000390357 MAGEB17A8MXT2 336 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 H2AFYO75367 372 aaKnown RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 BANF1O75531 89 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 ZNF37AP17032 561 aaPredicted RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 ALOX12P18054 663 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 JAK1P23458 1154 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 HPDP32754 393 aaPredicted RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 PDIA2Q13087 525 aaKnown RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 AFAP1L2Q8N4X5 818 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 SIRT6Q8N6T7 355 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 SLC5A11Q8WWX8 675 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 CDKL2Q92772 493 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 LPAR4Q99677 370 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 PITHD1Q9GZP4 211 aaPredicted RBP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 PELI2Q9HAT8 420 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 OLAHQ9NV23 265 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 NAALAD2Q9Y3Q0 740 aa12.84□□□□□ -0.35
TRBV4-1-201ENST00000390357 LRRK2Q5S007 2527 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 OR5H15A6NDH6 313 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 SGK494L7N484 410 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 FFAR3O14843 346 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 EIF3HO15372 352 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 GPR42O15529 346 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 TTI1O43156 1089 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 GALR3O60755 368 aaPredicted RBP12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 JRKO75564 520 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 RASAL1O95294 804 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 GUCA1CO95843 209 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 ITGAMP11215 1152 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 IL1RNP18510 177 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 GSTM2P28161 218 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 SCTRP47872 440 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
TRBV4-1-201ENST00000390357 NSDHLQ15738 373 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms